Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6NLQ92738 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6NLQ92738 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.82■□□□□ 0.6
USP6NLQ92738 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP6NLQ92738 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.82■□□□□ 0.6
USP6NLQ92738 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6NLQ92738 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.82■□□□□ 0.6
USP6NLQ92738 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6NLQ92738 AC079776.1-201ENST00000401540 1152 ntBASIC18.82■□□□□ 0.6
USP6NLQ92738 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.82■□□□□ 0.6
USP6NLQ92738 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
USP6NLQ92738 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
USP6NLQ92738 AC135586.1-201ENST00000539323 574 ntBASIC18.82■□□□□ 0.6
USP6NLQ92738 HILS1-202ENST00000545329 423 ntBASIC18.82■□□□□ 0.6
USP6NLQ92738 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.82■□□□□ 0.6
USP6NLQ92738 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.82■□□□□ 0.6
USP6NLQ92738 AC104794.3-201ENST00000566840 1248 ntBASIC18.82■□□□□ 0.6
USP6NLQ92738 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.82■□□□□ 0.6
USP6NLQ92738 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.82■□□□□ 0.6
USP6NLQ92738 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP6NLQ92738 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP6NLQ92738 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.82■□□□□ 0.6
USP6NLQ92738 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP6NLQ92738 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP6NLQ92738 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6NLQ92738 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.82■□□□□ 0.6
USP6NLQ92738 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.82■□□□□ 0.6
USP6NLQ92738 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP6NLQ92738 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6NLQ92738 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP6NLQ92738 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6NLQ92738 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
USP6NLQ92738 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.81■□□□□ 0.6
USP6NLQ92738 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP6NLQ92738 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6NLQ92738 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP6NLQ92738 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP6NLQ92738 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6NLQ92738 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6NLQ92738 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
USP6NLQ92738 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
USP6NLQ92738 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6NLQ92738 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP6NLQ92738 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.81■□□□□ 0.6
USP6NLQ92738 INE1-201ENST00000456273 945 ntBASIC18.81■□□□□ 0.6
USP6NLQ92738 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.81■□□□□ 0.6
USP6NLQ92738 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.81■□□□□ 0.6
USP6NLQ92738 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.81■□□□□ 0.6
USP6NLQ92738 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.81■□□□□ 0.6
USP6NLQ92738 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP6NLQ92738 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
USP6NLQ92738 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.81■□□□□ 0.6
USP6NLQ92738 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.81■□□□□ 0.6
USP6NLQ92738 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP6NLQ92738 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.81■□□□□ 0.6
USP6NLQ92738 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.81■□□□□ 0.6
USP6NLQ92738 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
USP6NLQ92738 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP6NLQ92738 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
USP6NLQ92738 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.8■□□□□ 0.6
USP6NLQ92738 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
USP6NLQ92738 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 AC022494.1-201ENST00000466044 728 ntBASIC18.8■□□□□ 0.6
USP6NLQ92738 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.8■□□□□ 0.6
USP6NLQ92738 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.8■□□□□ 0.6
USP6NLQ92738 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
USP6NLQ92738 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
USP6NLQ92738 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.8■□□□□ 0.6
USP6NLQ92738 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
USP6NLQ92738 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
USP6NLQ92738 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.8■□□□□ 0.6
USP6NLQ92738 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.8■□□□□ 0.6
USP6NLQ92738 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 AL391825.1-201ENST00000457671 1364 ntBASIC18.8■□□□□ 0.6
USP6NLQ92738 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP6NLQ92738 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.79■□□□□ 0.6
USP6NLQ92738 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.79■□□□□ 0.6
USP6NLQ92738 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USP6NLQ92738 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
USP6NLQ92738 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
USP6NLQ92738 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms