Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AL645728.1-201ENST00000366221 2101 ntBASIC21.77■■□□□ 1.08
RTF1Q92541 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RTF1Q92541 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTF1Q92541 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTF1Q92541 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
RTF1Q92541 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RTF1Q92541 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RTF1Q92541 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RTF1Q92541 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RTF1Q92541 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
RTF1Q92541 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RTF1Q92541 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.76■■□□□ 1.07
RTF1Q92541 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.76■■□□□ 1.07
RTF1Q92541 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RTF1Q92541 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.76■■□□□ 1.07
RTF1Q92541 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.76■■□□□ 1.07
RTF1Q92541 AL512356.2-201ENST00000546955 174 ntBASIC21.76■■□□□ 1.07
RTF1Q92541 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.76■■□□□ 1.07
RTF1Q92541 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.76■■□□□ 1.07
RTF1Q92541 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.76■■□□□ 1.07
RTF1Q92541 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.76■■□□□ 1.07
RTF1Q92541 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.76■■□□□ 1.07
RTF1Q92541 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.76■■□□□ 1.07
RTF1Q92541 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.76■■□□□ 1.07
RTF1Q92541 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC21.76■■□□□ 1.07
RTF1Q92541 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTF1Q92541 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RTF1Q92541 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
RTF1Q92541 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 AP001094.4-201ENST00000579008 2176 ntBASIC21.75■■□□□ 1.07
RTF1Q92541 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.75■■□□□ 1.07
RTF1Q92541 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.75■■□□□ 1.07
RTF1Q92541 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RTF1Q92541 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.75■■□□□ 1.07
RTF1Q92541 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.75■■□□□ 1.07
RTF1Q92541 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.75■■□□□ 1.07
RTF1Q92541 CNN2P2-201ENST00000443536 909 ntBASIC21.75■■□□□ 1.07
RTF1Q92541 CNN2P3-201ENST00000450201 906 ntBASIC21.75■■□□□ 1.07
RTF1Q92541 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.75■■□□□ 1.07
RTF1Q92541 AC067863.1-201ENST00000494933 530 ntBASIC21.75■■□□□ 1.07
RTF1Q92541 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
RTF1Q92541 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RTF1Q92541 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 AC015911.4-201ENST00000588022 1070 ntBASIC21.75■■□□□ 1.07
RTF1Q92541 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.75■■□□□ 1.07
RTF1Q92541 AL136317.3-201ENST00000618497 906 ntBASIC21.75■■□□□ 1.07
RTF1Q92541 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTF1Q92541 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RTF1Q92541 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RTF1Q92541 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.74■■□□□ 1.07
RTF1Q92541 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.74■■□□□ 1.07
RTF1Q92541 AC069262.1-201ENST00000539058 672 ntBASIC21.74■■□□□ 1.07
RTF1Q92541 AC026150.2-201ENST00000564693 1156 ntBASIC21.74■■□□□ 1.07
RTF1Q92541 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.74■■□□□ 1.07
RTF1Q92541 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.74■■□□□ 1.07
RTF1Q92541 AL139011.1-202ENST00000642063 584 ntBASIC21.74■■□□□ 1.07
RTF1Q92541 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
RTF1Q92541 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RTF1Q92541 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RTF1Q92541 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RTF1Q92541 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.74■■□□□ 1.07
RTF1Q92541 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RTF1Q92541 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTF1Q92541 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms