Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 AC092850.2-201ENST00000623821 2697 ntBASIC17.23■□□□□ 0.35
SCG3Q8WXD2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 SPDYE21P-201ENST00000413323 827 ntBASIC17.23■□□□□ 0.35
SCG3Q8WXD2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 RNA5SP415-201ENST00000517246 115 ntBASIC17.23■□□□□ 0.35
SCG3Q8WXD2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 AC012640.2-201ENST00000561606 901 ntBASIC17.23■□□□□ 0.35
SCG3Q8WXD2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 FAM197Y3-203ENST00000618346 717 ntBASIC17.23■□□□□ 0.35
SCG3Q8WXD2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 MED15P5-201ENST00000423150 992 ntBASIC17.22■□□□□ 0.35
SCG3Q8WXD2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 AC005593.1-201ENST00000624894 515 ntBASIC17.22■□□□□ 0.35
SCG3Q8WXD2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCG3Q8WXD2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.21■□□□□ 0.35
SCG3Q8WXD2 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 AL589182.2-201ENST00000619332 1049 ntBASIC17.21■□□□□ 0.35
SCG3Q8WXD2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.21■□□□□ 0.35
SCG3Q8WXD2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms