Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 AL138688.1-201ENST00000624851 1594 ntBASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 TUBB3P1-201ENST00000405796 1332 ntBASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 FRMD8P1-201ENST00000440433 1524 ntBASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 SPDYE14P-201ENST00000442619 822 ntBASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 AC026150.2-201ENST00000564693 1156 ntBASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 MPDU1-223ENST00000582151 728 ntBASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHKBP1Q8TBC3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 AC093214.1-201ENST00000511688 1107 ntBASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 SLC25A39P2-201ENST00000537614 270 ntBASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 MIR3909-201ENST00000579518 119 ntBASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.53■□□□□ 0.4
SHKBP1Q8TBC3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 AC131009.4-201ENST00000624048 1740 ntBASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 AL023806.1-201ENST00000603994 1649 ntBASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 PMS2P4-201ENST00000412466 1052 ntBASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 KLF2P3-201ENST00000451977 1087 ntBASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.52■□□□□ 0.4
SHKBP1Q8TBC3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms