Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 AC104109.2-201ENST00000602919 1418 ntBASIC16■□□□□ 0.15
SRFBP1Q8NEF9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16■□□□□ 0.15
SRFBP1Q8NEF9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 PMS2P1-201ENST00000431037 1228 ntBASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 HCG4B-203ENST00000450128 991 ntBASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 CYP2A7P1-201ENST00000595391 815 ntBASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 AC007064.4-201ENST00000637740 555 ntBASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 AL603756.1-201ENST00000606511 2163 ntBASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.99■□□□□ 0.15
SRFBP1Q8NEF9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 RNF216P1-203ENST00000404404 2427 ntBASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 KRT8P39-201ENST00000396270 1433 ntBASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.98■□□□□ 0.15
SRFBP1Q8NEF9 AL513480.1-201ENST00000451731 511 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms