Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 AC080080.1-201ENST00000625121 2420 ntBASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 AC005225.4-201ENST00000557330 545 ntBASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 AL138918.1-201ENST00000568306 659 ntBASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COLGALT1Q8NBJ5 AC063926.2-201ENST00000623766 1308 ntBASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 AC131009.4-201ENST00000624048 1740 ntBASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 SLC25A1P3-201ENST00000395415 828 ntBASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 MPDU1-223ENST00000582151 728 ntBASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
COLGALT1Q8NBJ5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 AP001094.4-201ENST00000579008 2176 ntBASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COLGALT1Q8NBJ5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COLGALT1Q8NBJ5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLGALT1Q8NBJ5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.96■□□□□ 0.47
COLGALT1Q8NBJ5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLGALT1Q8NBJ5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.96■□□□□ 0.47
COLGALT1Q8NBJ5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLGALT1Q8NBJ5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COLGALT1Q8NBJ5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COLGALT1Q8NBJ5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms