Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 AC009947.1-201ENST00000444350 727 ntBASIC17.25■□□□□ 0.35
PAF1Q8N7H5 IGHV3-65-201ENST00000523210 341 ntBASIC17.25■□□□□ 0.35
PAF1Q8N7H5 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PAF1Q8N7H5 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 RNA5SP416-201ENST00000516838 111 ntBASIC17.24■□□□□ 0.35
PAF1Q8N7H5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 AC106730.1-201ENST00000566722 1090 ntBASIC17.24■□□□□ 0.35
PAF1Q8N7H5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 AC027601.4-201ENST00000611259 610 ntBASIC17.24■□□□□ 0.35
PAF1Q8N7H5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAF1Q8N7H5 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.23■□□□□ 0.35
PAF1Q8N7H5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PAF1Q8N7H5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PAF1Q8N7H5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms