Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
C11orf42Q8N5U0 AC120114.3-201ENST00000611923 658 ntBASIC14□□□□□ -0.17
C11orf42Q8N5U0 AC004790.2-201ENST00000623588 572 ntBASIC14□□□□□ -0.17
C11orf42Q8N5U0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14□□□□□ -0.17
C11orf42Q8N5U0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14□□□□□ -0.17
C11orf42Q8N5U0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
C11orf42Q8N5U0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14□□□□□ -0.17
C11orf42Q8N5U0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
C11orf42Q8N5U0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14□□□□□ -0.17
C11orf42Q8N5U0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 AL118508.1-201ENST00000613502 2345 ntBASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 AC104109.2-201ENST00000602919 1418 ntBASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 AC092068.3-201ENST00000587894 2016 ntBASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 AC108751.1-201ENST00000490852 363 ntBASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
C11orf42Q8N5U0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 AC002310.6-201ENST00000624451 1377 ntBASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 AP000347.1-202ENST00000435868 847 ntBASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 PRSS29P-201ENST00000440800 595 ntBASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 REXO1L3P-201ENST00000622202 1288 ntBASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf42Q8N5U0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms