Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 RNA5SP415-201ENST00000517246 115 ntBASIC16.18■□□□□ 0.18
KRT78Q8N1N4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 AC087641.1-201ENST00000557561 1021 ntBASIC16.18■□□□□ 0.18
KRT78Q8N1N4 MIR4492-201ENST00000581627 80 ntBASIC16.18■□□□□ 0.18
KRT78Q8N1N4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
KRT78Q8N1N4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 CRYGEP-201ENST00000412192 528 ntBASIC16.17■□□□□ 0.18
KRT78Q8N1N4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT78Q8N1N4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 HLA-A-202ENST00000376806 1854 ntBASIC16.16■□□□□ 0.18
KRT78Q8N1N4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 PMS2P1-201ENST00000431037 1228 ntBASIC16.16■□□□□ 0.18
KRT78Q8N1N4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 AC009947.1-201ENST00000444350 727 ntBASIC16.16■□□□□ 0.18
KRT78Q8N1N4 AC079776.4-201ENST00000511039 504 ntBASIC16.16■□□□□ 0.18
KRT78Q8N1N4 IGHV3-22-201ENST00000520721 359 ntBASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT78Q8N1N4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms