Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 LYSMD4-203ENST00000378904 2122 ntBASIC18.17■□□□□ 0.5
VPS52Q8N1B4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 RN7SL589P-201ENST00000481268 310 ntBASIC18.16■□□□□ 0.5
VPS52Q8N1B4 AC079140.1-201ENST00000508039 487 ntBASIC18.16■□□□□ 0.5
VPS52Q8N1B4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 Z92544.3-201ENST00000624747 417 ntBASIC18.16■□□□□ 0.5
VPS52Q8N1B4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS52Q8N1B4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 AC243562.1-201ENST00000560672 389 ntBASIC18.15■□□□□ 0.5
VPS52Q8N1B4 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.15■□□□□ 0.5
VPS52Q8N1B4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VPS52Q8N1B4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.14■□□□□ 0.5
VPS52Q8N1B4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VPS52Q8N1B4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
VPS52Q8N1B4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.14■□□□□ 0.5
VPS52Q8N1B4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
VPS52Q8N1B4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS52Q8N1B4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
VPS52Q8N1B4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS52Q8N1B4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS52Q8N1B4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS52Q8N1B4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.14■□□□□ 0.49
VPS52Q8N1B4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.14■□□□□ 0.49
VPS52Q8N1B4 AC092474.2-201ENST00000424288 719 ntBASIC18.14■□□□□ 0.49
VPS52Q8N1B4 AC067863.1-201ENST00000494933 530 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms