Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF135Q8IUD6 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.75■□□□□ 0.43
RNF135Q8IUD6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 AC002558.1-201ENST00000488906 803 ntBASIC17.75■□□□□ 0.43
RNF135Q8IUD6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 AC009118.2-201ENST00000613275 655 ntBASIC17.75■□□□□ 0.43
RNF135Q8IUD6 UXT-AS1-201ENST00000590504 1525 ntBASIC17.75■□□□□ 0.43
RNF135Q8IUD6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF135Q8IUD6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 AC133963.1-201ENST00000504166 1679 ntBASIC17.74■□□□□ 0.43
RNF135Q8IUD6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 CU639417.3-201ENST00000624240 1404 ntBASIC17.74■□□□□ 0.43
RNF135Q8IUD6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 ACTG1P4-201ENST00000425123 1122 ntBASIC17.74■□□□□ 0.43
RNF135Q8IUD6 AC092580.3-201ENST00000430932 139 ntBASIC17.74■□□□□ 0.43
RNF135Q8IUD6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.74■□□□□ 0.43
RNF135Q8IUD6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 AC004890.2-204ENST00000481968 304 ntBASIC17.74■□□□□ 0.43
RNF135Q8IUD6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 IGHV3-71-201ENST00000523324 359 ntBASIC17.74■□□□□ 0.43
RNF135Q8IUD6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 LINC01451-201ENST00000623792 534 ntBASIC17.74■□□□□ 0.43
RNF135Q8IUD6 AL645728.2-201ENST00000641974 660 ntBASIC17.74■□□□□ 0.43
RNF135Q8IUD6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 AL645608.8-201ENST00000606034 2086 ntBASIC17.74■□□□□ 0.43
RNF135Q8IUD6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF135Q8IUD6 AC129492.6-201ENST00000611383 1305 ntBASIC17.73■□□□□ 0.43
RNF135Q8IUD6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 LYSMD4-203ENST00000378904 2122 ntBASIC17.73■□□□□ 0.43
RNF135Q8IUD6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 MRPS18AP1-201ENST00000414458 589 ntBASIC17.73■□□□□ 0.43
RNF135Q8IUD6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 AC241585.1-201ENST00000433527 519 ntBASIC17.73■□□□□ 0.43
RNF135Q8IUD6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 U91328.1-201ENST00000437528 223 ntBASIC17.73■□□□□ 0.43
RNF135Q8IUD6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 GPR53P-205ENST00000457298 1084 ntBASIC17.73■□□□□ 0.43
RNF135Q8IUD6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 MIR6080-201ENST00000617359 66 ntBASIC17.73■□□□□ 0.43
RNF135Q8IUD6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms