Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 AC132872.4-202ENST00000622924 2756 ntBASIC14.84□□□□□ -0.03
RTTNQ86VV8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 AC034105.1-201ENST00000563488 319 ntBASIC14.84□□□□□ -0.03
RTTNQ86VV8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 AL035252.4-201ENST00000624174 288 ntBASIC14.84□□□□□ -0.03
RTTNQ86VV8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTTNQ86VV8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RTTNQ86VV8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RTTNQ86VV8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RTTNQ86VV8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.83□□□□□ -0.03
RTTNQ86VV8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.83□□□□□ -0.03
RTTNQ86VV8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RTTNQ86VV8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 MIR770-201ENST00000390219 98 ntBASIC14.83□□□□□ -0.04
RTTNQ86VV8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTTNQ86VV8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.83□□□□□ -0.04
RTTNQ86VV8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 AL645939.2-201ENST00000427340 991 ntBASIC14.82□□□□□ -0.04
RTTNQ86VV8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 AL589182.2-201ENST00000619332 1049 ntBASIC14.82□□□□□ -0.04
RTTNQ86VV8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.82□□□□□ -0.04
RTTNQ86VV8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RTTNQ86VV8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTTNQ86VV8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms