Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 MIR4515-201ENST00000584082 81 ntBASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 FLJ38576-201ENST00000623820 2459 ntBASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 AC007064.4-201ENST00000637740 555 ntBASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 AC092865.6-201ENST00000642101 219 ntBASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LYSMD3Q7Z3D4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 AC040169.1-201ENST00000565382 521 ntBASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 AL671710.1-201ENST00000610245 2349 ntBASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD3Q7Z3D4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 HMGA1P7-201ENST00000406908 502 ntBASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 AC139530.3-201ENST00000620344 690 ntBASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 AP001350.2-201ENST00000625104 1094 ntBASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 AL645728.2-201ENST00000641974 660 ntBASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms