Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 AL365209.1-201ENST00000624418 6473 ntBASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 MIR940-201ENST00000401276 94 ntBASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 LINC00982-205ENST00000420957 435 ntBASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 RNA5SP415-201ENST00000517246 115 ntBASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 AC103702.1-201ENST00000548801 2630 ntBASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP1BQ7LBR1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 ACTG1P4-201ENST00000425123 1122 ntBASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 IGHV3-22-201ENST00000520721 359 ntBASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 TERC-201ENST00000602385 541 ntBASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 Z83851.2-201ENST00000609564 659 ntBASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP1BQ7LBR1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 PCDHB19P-201ENST00000570871 2371 ntBASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 AP000347.1-202ENST00000435868 847 ntBASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 SLC25A1P1-201ENST00000528351 927 ntBASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.52■□□□□ 0.08
CHMP1BQ7LBR1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms