Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 LINC00554-201ENST00000564841 3011 ntBASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD3Q6PCD5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.46■□□□□ 0.39
RFWD3Q6PCD5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
RFWD3Q6PCD5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RFWD3Q6PCD5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.46■□□□□ 0.38
RFWD3Q6PCD5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.46■□□□□ 0.38
RFWD3Q6PCD5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.46■□□□□ 0.38
RFWD3Q6PCD5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 TOP3BP1-201ENST00000420768 1380 ntBASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 AC005829.1-201ENST00000570002 483 ntBASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 AL691403.2-201ENST00000618460 490 ntBASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 C20orf181-201ENST00000623918 480 ntBASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD3Q6PCD5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms