Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CNKSR3Q6P9H4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 TTTY23B-201ENST00000442790 549 ntBASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 AC061975.2-201ENST00000581722 295 ntBASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 AC004461.2-201ENST00000629517 803 ntBASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNKSR3Q6P9H4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 MYCLP2-201ENST00000449268 967 ntBASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms