Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 BASP1P1-201ENST00000430708 665 ntBASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 INGX-202ENST00000489074 768 ntBASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 AC138761.1-201ENST00000584393 385 ntBASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 AC013467.2-201ENST00000605472 835 ntBASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 MIR6080-201ENST00000617359 66 ntBASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC62Q6P9F0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 TUBB8P12-201ENST00000308911 1335 ntBASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 TUBB7P-202ENST00000428444 1305 ntBASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 TUBB8P7-204ENST00000567960 1332 ntBASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 FOXO1B-201ENST00000504678 1527 ntBASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 MIR661-201ENST00000384842 89 ntBASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 COX20P2-201ENST00000452636 358 ntBASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 AC097493.3-201ENST00000509725 367 ntBASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 AC105233.2-201ENST00000523697 349 ntBASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 AF228730.5-201ENST00000530288 346 ntBASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 AL158211.3-201ENST00000607385 239 ntBASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC62Q6P9F0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 AC006277.1-201ENST00000624348 1610 ntBASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 UGT1A2P-201ENST00000454886 866 ntBASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 KRT18P34-201ENST00000488218 1270 ntBASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 MIR4453-201ENST00000584019 89 ntBASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 AL671710.1-201ENST00000610245 2349 ntBASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms