Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 AC084121.4-201ENST00000641598 221 ntBASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 AF228730.8-201ENST00000642140 221 ntBASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SWSAP1Q6NVH7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 AL139011.1-202ENST00000642063 584 ntBASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 AL512652.2-201ENST00000625156 1716 ntBASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 AL603756.1-201ENST00000606511 2163 ntBASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SWSAP1Q6NVH7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 HMGN1P19-201ENST00000436976 333 ntBASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.56■□□□□ 0.56
SWSAP1Q6NVH7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms