Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 SPDYE17-201ENST00000412399 783 ntBASIC16.03■□□□□ 0.16
RIF1Q5UIP0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 REXO1L9P-201ENST00000604264 2108 ntBASIC16.03■□□□□ 0.16
RIF1Q5UIP0 AC021097.1-201ENST00000607902 574 ntBASIC16.03■□□□□ 0.16
RIF1Q5UIP0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RIF1Q5UIP0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 FNTAP2-201ENST00000430308 634 ntBASIC16.02■□□□□ 0.16
RIF1Q5UIP0 TIMM17BP1-201ENST00000545713 516 ntBASIC16.02■□□□□ 0.16
RIF1Q5UIP0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 NDUFV2P1-201ENST00000596415 907 ntBASIC16.02■□□□□ 0.16
RIF1Q5UIP0 AC097724.1-201ENST00000609581 426 ntBASIC16.02■□□□□ 0.16
RIF1Q5UIP0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 AC008687.7-202ENST00000637404 953 ntBASIC16.02■□□□□ 0.16
RIF1Q5UIP0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
RIF1Q5UIP0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 MIR33B-201ENST00000385104 96 ntBASIC16.02■□□□□ 0.15
RIF1Q5UIP0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 AC026954.1-201ENST00000429771 1293 ntBASIC16.02■□□□□ 0.15
RIF1Q5UIP0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 AL355864.2-201ENST00000447420 863 ntBASIC16.02■□□□□ 0.15
RIF1Q5UIP0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 AL391069.4-201ENST00000609583 481 ntBASIC16.02■□□□□ 0.15
RIF1Q5UIP0 AC005695.3-201ENST00000614522 232 ntBASIC16.02■□□□□ 0.15
RIF1Q5UIP0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.02■□□□□ 0.15
RIF1Q5UIP0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 CYP2A7P1-201ENST00000595391 815 ntBASIC16.01■□□□□ 0.15
RIF1Q5UIP0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 MIR6069-201ENST00000620069 79 ntBASIC16.01■□□□□ 0.15
RIF1Q5UIP0 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.01■□□□□ 0.15
RIF1Q5UIP0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIF1Q5UIP0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms