Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 IGHV3-42-201ENST00000520410 361 ntBASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 AC069120.2-201ENST00000524091 540 ntBASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 RARRES2P9-201ENST00000565168 469 ntBASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.01□□□□□ -0.01
RNFT1Q5M7Z0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 COX20P2-201ENST00000452636 358 ntBASIC15□□□□□ -0.01
RNFT1Q5M7Z0 PRYP6-201ENST00000514804 343 ntBASIC15□□□□□ -0.01
RNFT1Q5M7Z0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 AL158211.3-201ENST00000607385 239 ntBASIC15□□□□□ -0.01
RNFT1Q5M7Z0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 AC018529.1-201ENST00000613063 361 ntBASIC15□□□□□ -0.01
RNFT1Q5M7Z0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15□□□□□ -0.01
RNFT1Q5M7Z0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 AC020916.1-201ENST00000587762 1774 ntBASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 AC073439.1-201ENST00000624121 1774 ntBASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 AC236430.1-201ENST00000402231 743 ntBASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 TSPY16P-201ENST00000449843 468 ntBASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 RN7SL204P-201ENST00000582831 262 ntBASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 KRT8P39-201ENST00000396270 1433 ntBASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 AL023806.1-201ENST00000603994 1649 ntBASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.99□□□□□ -0.01
RNFT1Q5M7Z0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms