Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB3Q15768 AC022211.2-201ENST00000585075 2527 ntBASIC14.25□□□□□ -0.13
EFNB3Q15768 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNB3Q15768 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 AP001094.4-201ENST00000579008 2176 ntBASIC14.25□□□□□ -0.13
EFNB3Q15768 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 AL139400.1-201ENST00000366220 510 ntBASIC14.25□□□□□ -0.13
EFNB3Q15768 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNB3Q15768 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNB3Q15768 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 AC069335.1-201ENST00000489972 472 ntBASIC14.25□□□□□ -0.13
EFNB3Q15768 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNB3Q15768 IGHV3-62-201ENST00000520057 340 ntBASIC14.25□□□□□ -0.13
EFNB3Q15768 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNB3Q15768 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNB3Q15768 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.25□□□□□ -0.13
EFNB3Q15768 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNB3Q15768 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNB3Q15768 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNB3Q15768 AC084121.4-201ENST00000641598 221 ntBASIC14.25□□□□□ -0.13
EFNB3Q15768 AF228730.8-201ENST00000642140 221 ntBASIC14.25□□□□□ -0.13
EFNB3Q15768 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNB3Q15768 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EFNB3Q15768 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB3Q15768 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EFNB3Q15768 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB3Q15768 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
EFNB3Q15768 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB3Q15768 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.24□□□□□ -0.13
EFNB3Q15768 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB3Q15768 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.24□□□□□ -0.13
EFNB3Q15768 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
EFNB3Q15768 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB3Q15768 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 KRT18P32-201ENST00000424695 1287 ntBASIC14.24□□□□□ -0.13
EFNB3Q15768 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.24□□□□□ -0.13
EFNB3Q15768 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB3Q15768 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.24□□□□□ -0.13
EFNB3Q15768 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 CYMP-203ENST00000474680 1263 ntBASIC14.24□□□□□ -0.13
EFNB3Q15768 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.24□□□□□ -0.13
EFNB3Q15768 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.24□□□□□ -0.13
EFNB3Q15768 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EFNB3Q15768 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.24□□□□□ -0.13
EFNB3Q15768 LINC01225-203ENST00000563550 1244 ntBASIC14.24□□□□□ -0.13
EFNB3Q15768 AC004449.1-201ENST00000564240 433 ntBASIC14.24□□□□□ -0.13
EFNB3Q15768 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.24□□□□□ -0.13
EFNB3Q15768 AC008267.7-201ENST00000624570 1194 ntBASIC14.24□□□□□ -0.13
EFNB3Q15768 LINC00628-201ENST00000628516 1289 ntBASIC14.24□□□□□ -0.13
EFNB3Q15768 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB3Q15768 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EFNB3Q15768 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
EFNB3Q15768 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
EFNB3Q15768 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms