Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL031432.2-201ENST00000566714 459 ntBASIC19.4■□□□□ 0.7
SSRP1Q08945 AL928711.1-201ENST00000570165 459 ntBASIC19.4■□□□□ 0.7
SSRP1Q08945 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.4■□□□□ 0.7
SSRP1Q08945 AL645728.2-201ENST00000641974 660 ntBASIC19.4■□□□□ 0.7
SSRP1Q08945 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.4■□□□□ 0.7
SSRP1Q08945 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SSRP1Q08945 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSRP1Q08945 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SSRP1Q08945 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSRP1Q08945 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSRP1Q08945 AC079328.2-201ENST00000561241 3354 ntBASIC19.4■□□□□ 0.7
SSRP1Q08945 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SSRP1Q08945 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SSRP1Q08945 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SSRP1Q08945 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSRP1Q08945 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.39■□□□□ 0.7
SSRP1Q08945 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SSRP1Q08945 ALOX12P2-203ENST00000570921 1945 ntBASIC19.39■□□□□ 0.7
SSRP1Q08945 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SSRP1Q08945 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.39■□□□□ 0.69
SSRP1Q08945 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SSRP1Q08945 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.39■□□□□ 0.69
SSRP1Q08945 KRT18P2-201ENST00000447938 1258 ntBASIC19.39■□□□□ 0.69
SSRP1Q08945 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.39■□□□□ 0.69
SSRP1Q08945 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.39■□□□□ 0.69
SSRP1Q08945 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.39■□□□□ 0.69
SSRP1Q08945 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.39■□□□□ 0.69
SSRP1Q08945 AC106730.1-201ENST00000566722 1090 ntBASIC19.39■□□□□ 0.69
SSRP1Q08945 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.39■□□□□ 0.69
SSRP1Q08945 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.39■□□□□ 0.69
SSRP1Q08945 AC007064.4-201ENST00000637740 555 ntBASIC19.39■□□□□ 0.69
SSRP1Q08945 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SSRP1Q08945 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SSRP1Q08945 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.39■□□□□ 0.69
SSRP1Q08945 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.39■□□□□ 0.69
SSRP1Q08945 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.39■□□□□ 0.69
SSRP1Q08945 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SSRP1Q08945 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SSRP1Q08945 AL031731.1-201ENST00000642131 2094 ntBASIC19.39■□□□□ 0.69
SSRP1Q08945 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSRP1Q08945 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SSRP1Q08945 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SSRP1Q08945 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SSRP1Q08945 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SSRP1Q08945 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SSRP1Q08945 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SSRP1Q08945 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.38■□□□□ 0.69
SSRP1Q08945 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.38■□□□□ 0.69
SSRP1Q08945 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.38■□□□□ 0.69
SSRP1Q08945 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.38■□□□□ 0.69
SSRP1Q08945 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SSRP1Q08945 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.38■□□□□ 0.69
SSRP1Q08945 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SSRP1Q08945 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.38■□□□□ 0.69
SSRP1Q08945 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.38■□□□□ 0.69
SSRP1Q08945 AC018845.2-201ENST00000568326 409 ntBASIC19.38■□□□□ 0.69
SSRP1Q08945 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
SSRP1Q08945 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.38■□□□□ 0.69
SSRP1Q08945 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SSRP1Q08945 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SSRP1Q08945 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.38■□□□□ 0.69
SSRP1Q08945 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSRP1Q08945 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SSRP1Q08945 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSRP1Q08945 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSRP1Q08945 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms