Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.09■□□□□ 0.65
HTRA3P83110 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.09■□□□□ 0.65
HTRA3P83110 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.09■□□□□ 0.65
HTRA3P83110 NDUFV2P1-201ENST00000596415 907 ntBASIC19.09■□□□□ 0.65
HTRA3P83110 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.09■□□□□ 0.65
HTRA3P83110 AL391069.4-201ENST00000609583 481 ntBASIC19.09■□□□□ 0.65
HTRA3P83110 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
HTRA3P83110 AC079336.7-201ENST00000623428 1078 ntBASIC19.09■□□□□ 0.65
HTRA3P83110 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.09■□□□□ 0.65
HTRA3P83110 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HTRA3P83110 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HTRA3P83110 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.08■□□□□ 0.65
HTRA3P83110 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HTRA3P83110 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HTRA3P83110 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HTRA3P83110 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.08■□□□□ 0.65
HTRA3P83110 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HTRA3P83110 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.08■□□□□ 0.65
HTRA3P83110 AC134312.5-201ENST00000568031 1313 ntBASIC19.08■□□□□ 0.65
HTRA3P83110 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.08■□□□□ 0.65
HTRA3P83110 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.08■□□□□ 0.65
HTRA3P83110 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HTRA3P83110 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.08■□□□□ 0.64
HTRA3P83110 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.08■□□□□ 0.64
HTRA3P83110 EEF1DP6-201ENST00000449232 372 ntBASIC19.08■□□□□ 0.64
HTRA3P83110 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.08■□□□□ 0.64
HTRA3P83110 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.08■□□□□ 0.64
HTRA3P83110 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC19.08■□□□□ 0.64
HTRA3P83110 AL133499.1-201ENST00000596207 608 ntBASIC19.08■□□□□ 0.64
HTRA3P83110 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.08■□□□□ 0.64
HTRA3P83110 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
HTRA3P83110 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTRA3P83110 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HTRA3P83110 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.08■□□□□ 0.64
HTRA3P83110 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.08■□□□□ 0.64
HTRA3P83110 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTRA3P83110 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.08■□□□□ 0.64
HTRA3P83110 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTRA3P83110 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTRA3P83110 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTRA3P83110 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HTRA3P83110 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HTRA3P83110 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HTRA3P83110 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HTRA3P83110 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.07■□□□□ 0.64
HTRA3P83110 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.07■□□□□ 0.64
HTRA3P83110 AC023310.1-201ENST00000554836 735 ntBASIC19.07■□□□□ 0.64
HTRA3P83110 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 AC036164.1-201ENST00000570544 333 ntBASIC19.07■□□□□ 0.64
HTRA3P83110 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.07■□□□□ 0.64
HTRA3P83110 AL353726.2-201ENST00000623259 884 ntBASIC19.07■□□□□ 0.64
HTRA3P83110 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.07■□□□□ 0.64
HTRA3P83110 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.07■□□□□ 0.64
HTRA3P83110 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTRA3P83110 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.06■□□□□ 0.64
HTRA3P83110 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HTRA3P83110 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.06■□□□□ 0.64
HTRA3P83110 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTRA3P83110 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTRA3P83110 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
HTRA3P83110 REXO1L9P-201ENST00000604264 2108 ntBASIC19.06■□□□□ 0.64
HTRA3P83110 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HTRA3P83110 AC135776.1-201ENST00000319817 2481 ntBASIC19.06■□□□□ 0.64
HTRA3P83110 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTRA3P83110 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.06■□□□□ 0.64
HTRA3P83110 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTRA3P83110 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTRA3P83110 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HTRA3P83110 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTRA3P83110 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.06■□□□□ 0.64
HTRA3P83110 MAGEA5-201ENST00000446757 942 ntBASIC19.06■□□□□ 0.64
HTRA3P83110 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.06■□□□□ 0.64
HTRA3P83110 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.06■□□□□ 0.64
HTRA3P83110 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.06■□□□□ 0.64
HTRA3P83110 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.06■□□□□ 0.64
HTRA3P83110 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
HTRA3P83110 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms