Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
AP3S2P59780 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
AP3S2P59780 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.43□□□□□ -0.1
AP3S2P59780 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.42□□□□□ -0.1
AP3S2P59780 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AP3S2P59780 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.42□□□□□ -0.1
AP3S2P59780 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.42□□□□□ -0.1
AP3S2P59780 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
AP3S2P59780 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.42□□□□□ -0.1
AP3S2P59780 FAM197Y4-202ENST00000622692 608 ntBASIC14.42□□□□□ -0.1
AP3S2P59780 AL139011.1-202ENST00000642063 584 ntBASIC14.42□□□□□ -0.1
AP3S2P59780 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
AP3S2P59780 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
AP3S2P59780 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 AL135999.2-201ENST00000622438 1686 ntBASIC14.42□□□□□ -0.1
AP3S2P59780 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
AP3S2P59780 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP3S2P59780 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S2P59780 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AP3S2P59780 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S2P59780 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AP3S2P59780 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 RPS2P55-201ENST00000397318 883 ntBASIC14.41□□□□□ -0.1
AP3S2P59780 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.41□□□□□ -0.1
AP3S2P59780 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
AP3S2P59780 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.41□□□□□ -0.1
AP3S2P59780 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.41□□□□□ -0.1
AP3S2P59780 C2orf69P3-201ENST00000565542 1120 ntBASIC14.41□□□□□ -0.1
AP3S2P59780 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.41□□□□□ -0.1
AP3S2P59780 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms