Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.99□□□□□ -0.01
CLRN1P58418 FAM215A-202ENST00000632077 792 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.99□□□□□ -0.01
CLRN1P58418 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.99□□□□□ -0.01
CLRN1P58418 UBALD1-205ENST00000590891 2641 ntBASIC14.99□□□□□ -0.01
CLRN1P58418 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.99□□□□□ -0.01
CLRN1P58418 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CLRN1P58418 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CLRN1P58418 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CLRN1P58418 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.99□□□□□ -0.01
CLRN1P58418 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
CLRN1P58418 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLRN1P58418 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.98□□□□□ -0.01
CLRN1P58418 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.98□□□□□ -0.01
CLRN1P58418 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLRN1P58418 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLRN1P58418 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLRN1P58418 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.98□□□□□ -0.01
CLRN1P58418 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
CLRN1P58418 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.98□□□□□ -0.01
CLRN1P58418 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.98□□□□□ -0.01
CLRN1P58418 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.98□□□□□ -0.01
CLRN1P58418 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CLRN1P58418 AL031284.1-201ENST00000419297 478 ntBASIC14.98□□□□□ -0.01
CLRN1P58418 IGHV3-65-201ENST00000523210 341 ntBASIC14.98□□□□□ -0.01
CLRN1P58418 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.98□□□□□ -0.01
CLRN1P58418 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.98□□□□□ -0.01
CLRN1P58418 AC012640.2-201ENST00000561606 901 ntBASIC14.98□□□□□ -0.01
CLRN1P58418 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.98□□□□□ -0.01
CLRN1P58418 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.98□□□□□ -0.01
CLRN1P58418 AC013467.2-201ENST00000605472 835 ntBASIC14.98□□□□□ -0.01
CLRN1P58418 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.98□□□□□ -0.01
CLRN1P58418 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.98□□□□□ -0.01
CLRN1P58418 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.98□□□□□ -0.01
CLRN1P58418 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLRN1P58418 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLRN1P58418 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CLRN1P58418 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLRN1P58418 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.98□□□□□ -0.01
CLRN1P58418 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLRN1P58418 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLRN1P58418 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLRN1P58418 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLRN1P58418 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 AC129492.6-201ENST00000611383 1305 ntBASIC14.97□□□□□ -0.01
CLRN1P58418 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 AC124067.4-201ENST00000519691 2379 ntBASIC14.97□□□□□ -0.01
CLRN1P58418 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CLRN1P58418 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 MRPL20P1-201ENST00000400819 433 ntBASIC14.97□□□□□ -0.01
CLRN1P58418 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.97□□□□□ -0.01
CLRN1P58418 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.97□□□□□ -0.01
CLRN1P58418 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.97□□□□□ -0.01
CLRN1P58418 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 HLA-J-202ENST00000469281 1241 ntBASIC14.97□□□□□ -0.01
CLRN1P58418 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CLRN1P58418 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 AC091167.2-201ENST00000579581 588 ntBASIC14.97□□□□□ -0.01
CLRN1P58418 MPDU1-223ENST00000582151 728 ntBASIC14.97□□□□□ -0.01
CLRN1P58418 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLRN1P58418 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CLRN1P58418 REXO1L3P-201ENST00000622202 1288 ntBASIC14.97□□□□□ -0.01
CLRN1P58418 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLRN1P58418 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms