Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB38P57729 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB38P57729 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB38P57729 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RAB38P57729 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB38P57729 AC092474.2-201ENST00000424288 719 ntBASIC15.71■□□□□ 0.11
RAB38P57729 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.71■□□□□ 0.11
RAB38P57729 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.71■□□□□ 0.11
RAB38P57729 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB38P57729 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB38P57729 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB38P57729 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.71■□□□□ 0.11
RAB38P57729 AL161645.1-201ENST00000622716 1255 ntBASIC15.71■□□□□ 0.11
RAB38P57729 C20orf181-201ENST00000623918 480 ntBASIC15.71■□□□□ 0.11
RAB38P57729 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB38P57729 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB38P57729 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB38P57729 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
RAB38P57729 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB38P57729 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB38P57729 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB38P57729 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB38P57729 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.71■□□□□ 0.1
RAB38P57729 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAB38P57729 AC011676.5-201ENST00000624864 2660 ntBASIC15.71■□□□□ 0.1
RAB38P57729 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB38P57729 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RAB38P57729 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB38P57729 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RAB38P57729 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RAB38P57729 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB38P57729 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB38P57729 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB38P57729 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB38P57729 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB38P57729 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 AL078644.1-201ENST00000609881 752 ntBASIC15.7■□□□□ 0.1
RAB38P57729 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB38P57729 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB38P57729 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB38P57729 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RAB38P57729 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB38P57729 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB38P57729 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
RAB38P57729 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB38P57729 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB38P57729 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB38P57729 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB38P57729 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.69■□□□□ 0.1
RAB38P57729 AL031731.1-201ENST00000642131 2094 ntBASIC15.69■□□□□ 0.1
RAB38P57729 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB38P57729 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB38P57729 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB38P57729 AC009053.2-201ENST00000563701 2365 ntBASIC15.69■□□□□ 0.1
RAB38P57729 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
RAB38P57729 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB38P57729 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB38P57729 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB38P57729 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB38P57729 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB38P57729 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB38P57729 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB38P57729 MKNK2P1-201ENST00000437526 628 ntBASIC15.69■□□□□ 0.1
RAB38P57729 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB38P57729 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB38P57729 ALG1L5P-201ENST00000482043 771 ntBASIC15.69■□□□□ 0.1
RAB38P57729 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB38P57729 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB38P57729 AC092865.5-201ENST00000545435 363 ntBASIC15.69■□□□□ 0.1
RAB38P57729 AC099522.2-201ENST00000607001 744 ntBASIC15.69■□□□□ 0.1
RAB38P57729 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
RAB38P57729 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB38P57729 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB38P57729 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB38P57729 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB38P57729 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB38P57729 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms