Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LINC00265-3P-201ENST00000447588 903 ntBASIC15.95■□□□□ 0.14
NR1H2P55055 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.95■□□□□ 0.14
NR1H2P55055 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H2P55055 RNF126P1-202ENST00000569893 925 ntBASIC15.95■□□□□ 0.14
NR1H2P55055 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.95■□□□□ 0.14
NR1H2P55055 AC008687.5-201ENST00000593746 558 ntBASIC15.95■□□□□ 0.14
NR1H2P55055 GPR32P1-201ENST00000601788 811 ntBASIC15.95■□□□□ 0.14
NR1H2P55055 AC024563.2-201ENST00000603282 481 ntBASIC15.95■□□□□ 0.14
NR1H2P55055 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H2P55055 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.95■□□□□ 0.14
NR1H2P55055 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H2P55055 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H2P55055 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H2P55055 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H2P55055 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H2P55055 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
NR1H2P55055 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H2P55055 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H2P55055 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H2P55055 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H2P55055 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.94■□□□□ 0.14
NR1H2P55055 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
NR1H2P55055 AC093525.9-201ENST00000624961 1746 ntBASIC15.94■□□□□ 0.14
NR1H2P55055 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.94■□□□□ 0.14
NR1H2P55055 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.94■□□□□ 0.14
NR1H2P55055 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H2P55055 FAAHP1-202ENST00000446499 1238 ntBASIC15.94■□□□□ 0.14
NR1H2P55055 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.94■□□□□ 0.14
NR1H2P55055 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H2P55055 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H2P55055 AC012615.1-201ENST00000565797 1299 ntBASIC15.94■□□□□ 0.14
NR1H2P55055 AL390719.2-201ENST00000606993 987 ntBASIC15.94■□□□□ 0.14
NR1H2P55055 AL121772.3-201ENST00000610840 674 ntBASIC15.94■□□□□ 0.14
NR1H2P55055 IGHV3-41-201ENST00000613121 348 ntBASIC15.94■□□□□ 0.14
NR1H2P55055 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.94■□□□□ 0.14
NR1H2P55055 KRT89P-201ENST00000620027 1478 ntBASIC15.94■□□□□ 0.14
NR1H2P55055 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NR1H2P55055 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NR1H2P55055 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H2P55055 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 NORAD-201ENST00000565493 5339 ntBASIC15.94■□□□□ 0.14
NR1H2P55055 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
NR1H2P55055 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.94■□□□□ 0.14
NR1H2P55055 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.94■□□□□ 0.14
NR1H2P55055 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NR1H2P55055 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NR1H2P55055 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.94■□□□□ 0.14
NR1H2P55055 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NR1H2P55055 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NR1H2P55055 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.93■□□□□ 0.14
NR1H2P55055 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 AC006538.1-201ENST00000567905 1585 ntBASIC15.93■□□□□ 0.14
NR1H2P55055 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.93■□□□□ 0.14
NR1H2P55055 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.93■□□□□ 0.14
NR1H2P55055 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.93■□□□□ 0.14
NR1H2P55055 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NR1H2P55055 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.93■□□□□ 0.14
NR1H2P55055 VENTXP7-201ENST00000475503 772 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms