Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PMS1P54277 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PMS1P54277 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.42■□□□□ 0.54
PMS1P54277 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.41■□□□□ 0.54
PMS1P54277 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 AC046158.3-201ENST00000624947 2558 ntBASIC18.41■□□□□ 0.54
PMS1P54277 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.41■□□□□ 0.54
PMS1P54277 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.41■□□□□ 0.54
PMS1P54277 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.41■□□□□ 0.54
PMS1P54277 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.41■□□□□ 0.54
PMS1P54277 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.41■□□□□ 0.54
PMS1P54277 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PMS1P54277 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.41■□□□□ 0.54
PMS1P54277 GGTLC5P-201ENST00000617623 998 ntBASIC18.41■□□□□ 0.54
PMS1P54277 AC117500.6-201ENST00000624871 588 ntBASIC18.41■□□□□ 0.54
PMS1P54277 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PMS1P54277 MTHFR-217ENST00000641820 1569 ntBASIC18.41■□□□□ 0.54
PMS1P54277 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PMS1P54277 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.41■□□□□ 0.54
PMS1P54277 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
PMS1P54277 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PMS1P54277 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PMS1P54277 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.4■□□□□ 0.54
PMS1P54277 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
PMS1P54277 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.4■□□□□ 0.54
PMS1P54277 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.4■□□□□ 0.54
PMS1P54277 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.4■□□□□ 0.54
PMS1P54277 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.4■□□□□ 0.54
PMS1P54277 AC108073.2-201ENST00000464002 357 ntBASIC18.4■□□□□ 0.54
PMS1P54277 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.4■□□□□ 0.54
PMS1P54277 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PMS1P54277 MIR7706-201ENST00000613747 67 ntBASIC18.4■□□□□ 0.54
PMS1P54277 AC004790.2-201ENST00000623588 572 ntBASIC18.4■□□□□ 0.54
PMS1P54277 AC007950.2-201ENST00000615045 2347 ntBASIC18.4■□□□□ 0.54
PMS1P54277 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PMS1P54277 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PMS1P54277 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PMS1P54277 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.39■□□□□ 0.54
PMS1P54277 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.39■□□□□ 0.53
PMS1P54277 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
PMS1P54277 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PMS1P54277 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.39■□□□□ 0.53
PMS1P54277 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.39■□□□□ 0.53
PMS1P54277 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.39■□□□□ 0.53
PMS1P54277 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.39■□□□□ 0.53
PMS1P54277 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 AF186996.4-201ENST00000467186 377 ntBASIC18.39■□□□□ 0.53
PMS1P54277 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.39■□□□□ 0.53
PMS1P54277 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.39■□□□□ 0.53
PMS1P54277 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.39■□□□□ 0.53
PMS1P54277 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.39■□□□□ 0.53
PMS1P54277 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PMS1P54277 AC129492.6-201ENST00000611383 1305 ntBASIC18.39■□□□□ 0.53
PMS1P54277 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.39■□□□□ 0.53
PMS1P54277 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PMS1P54277 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms