Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ACLYP53396 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ACLYP53396 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ACLYP53396 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.27■□□□□ 0.51
ACLYP53396 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ACLYP53396 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
ACLYP53396 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ACLYP53396 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ACLYP53396 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.27■□□□□ 0.51
ACLYP53396 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.26■□□□□ 0.51
ACLYP53396 LINC02012-201ENST00000608206 1725 ntBASIC18.26■□□□□ 0.51
ACLYP53396 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.26■□□□□ 0.51
ACLYP53396 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ACLYP53396 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ACLYP53396 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ACLYP53396 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.26■□□□□ 0.51
ACLYP53396 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.26■□□□□ 0.51
ACLYP53396 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.26■□□□□ 0.51
ACLYP53396 AC055876.2-201ENST00000531834 546 ntBASIC18.26■□□□□ 0.51
ACLYP53396 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.26■□□□□ 0.51
ACLYP53396 SRD5A3P1-201ENST00000603021 949 ntBASIC18.26■□□□□ 0.51
ACLYP53396 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.26■□□□□ 0.51
ACLYP53396 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.26■□□□□ 0.51
ACLYP53396 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.26■□□□□ 0.51
ACLYP53396 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.26■□□□□ 0.51
ACLYP53396 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.26■□□□□ 0.51
ACLYP53396 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ACLYP53396 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
ACLYP53396 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.26■□□□□ 0.51
ACLYP53396 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ACLYP53396 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ACLYP53396 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.25■□□□□ 0.51
ACLYP53396 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ACLYP53396 HCG11-201ENST00000411553 5696 ntBASIC18.25■□□□□ 0.51
ACLYP53396 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ACLYP53396 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.25■□□□□ 0.51
ACLYP53396 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.25■□□□□ 0.51
ACLYP53396 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ACLYP53396 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ACLYP53396 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
ACLYP53396 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ACLYP53396 RN7SL837P-201ENST00000463010 287 ntBASIC18.25■□□□□ 0.51
ACLYP53396 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.25■□□□□ 0.51
ACLYP53396 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.25■□□□□ 0.51
ACLYP53396 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.25■□□□□ 0.51
ACLYP53396 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ACLYP53396 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.25■□□□□ 0.51
ACLYP53396 AL033527.5-202ENST00000641632 1098 ntBASIC18.25■□□□□ 0.51
ACLYP53396 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ACLYP53396 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 KRT8P12-202ENST00000472924 1397 ntBASIC18.25■□□□□ 0.51
ACLYP53396 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ACLYP53396 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.25■□□□□ 0.51
ACLYP53396 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ACLYP53396 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.25■□□□□ 0.51
ACLYP53396 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ACLYP53396 SNX33P1-201ENST00000592116 1762 ntBASIC18.25■□□□□ 0.51
ACLYP53396 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACLYP53396 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACLYP53396 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ACLYP53396 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACLYP53396 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
ACLYP53396 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ACLYP53396 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ACLYP53396 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACLYP53396 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.24■□□□□ 0.51
ACLYP53396 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ACLYP53396 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.24■□□□□ 0.51
ACLYP53396 TTTY23B-201ENST00000442790 549 ntBASIC18.24■□□□□ 0.51
ACLYP53396 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.24■□□□□ 0.51
ACLYP53396 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ACLYP53396 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.24■□□□□ 0.51
ACLYP53396 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.24■□□□□ 0.51
ACLYP53396 AC024267.1-201ENST00000582320 895 ntBASIC18.24■□□□□ 0.51
ACLYP53396 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.24■□□□□ 0.51
ACLYP53396 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.24■□□□□ 0.51
ACLYP53396 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms