Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 NBPF21P-201ENST00000425093 1451 ntBASIC16.48■□□□□ 0.23
GTF2A1P52655 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.48■□□□□ 0.23
GTF2A1P52655 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GTF2A1P52655 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GTF2A1P52655 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GTF2A1P52655 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.47■□□□□ 0.23
GTF2A1P52655 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
GTF2A1P52655 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.47■□□□□ 0.23
GTF2A1P52655 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GTF2A1P52655 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.47■□□□□ 0.23
GTF2A1P52655 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.47■□□□□ 0.23
GTF2A1P52655 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.47■□□□□ 0.23
GTF2A1P52655 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.47■□□□□ 0.23
GTF2A1P52655 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.47■□□□□ 0.23
GTF2A1P52655 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GTF2A1P52655 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
GTF2A1P52655 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
GTF2A1P52655 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GTF2A1P52655 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.47■□□□□ 0.23
GTF2A1P52655 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.47■□□□□ 0.23
GTF2A1P52655 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.47■□□□□ 0.23
GTF2A1P52655 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.47■□□□□ 0.23
GTF2A1P52655 AC005562.1-201ENST00000583030 3219 ntBASIC16.47■□□□□ 0.23
GTF2A1P52655 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GTF2A1P52655 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.47■□□□□ 0.23
GTF2A1P52655 AC006449.6-201ENST00000612330 2296 ntBASIC16.47■□□□□ 0.23
GTF2A1P52655 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.46■□□□□ 0.23
GTF2A1P52655 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.46■□□□□ 0.23
GTF2A1P52655 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.46■□□□□ 0.23
GTF2A1P52655 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.46■□□□□ 0.23
GTF2A1P52655 POU5F1P3-201ENST00000428824 1078 ntBASIC16.46■□□□□ 0.23
GTF2A1P52655 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GTF2A1P52655 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.46■□□□□ 0.23
GTF2A1P52655 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.46■□□□□ 0.23
GTF2A1P52655 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.46■□□□□ 0.23
GTF2A1P52655 PRKY-204ENST00000533551 1019 ntBASIC16.46■□□□□ 0.23
GTF2A1P52655 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.46■□□□□ 0.23
GTF2A1P52655 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.46■□□□□ 0.23
GTF2A1P52655 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.46■□□□□ 0.23
GTF2A1P52655 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GTF2A1P52655 AP005117.1-202ENST00000581724 1908 ntBASIC16.46■□□□□ 0.23
GTF2A1P52655 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.46■□□□□ 0.23
GTF2A1P52655 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
GTF2A1P52655 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.46■□□□□ 0.23
GTF2A1P52655 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
GTF2A1P52655 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.46■□□□□ 0.23
GTF2A1P52655 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.46■□□□□ 0.23
GTF2A1P52655 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GTF2A1P52655 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.46■□□□□ 0.22
GTF2A1P52655 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
GTF2A1P52655 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
GTF2A1P52655 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GTF2A1P52655 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
GTF2A1P52655 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
GTF2A1P52655 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GTF2A1P52655 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GTF2A1P52655 KRT8P11-201ENST00000409686 1436 ntBASIC16.45■□□□□ 0.22
GTF2A1P52655 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GTF2A1P52655 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GTF2A1P52655 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GTF2A1P52655 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
GTF2A1P52655 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GTF2A1P52655 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GTF2A1P52655 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
GTF2A1P52655 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GTF2A1P52655 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GTF2A1P52655 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.45■□□□□ 0.22
GTF2A1P52655 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms