Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.28■□□□□ 0.2
CLCN2P51788 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLCN2P51788 SPDYE21P-201ENST00000413323 827 ntBASIC16.28■□□□□ 0.2
CLCN2P51788 AC018712.1-201ENST00000455767 687 ntBASIC16.28■□□□□ 0.2
CLCN2P51788 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 AC093909.1-201ENST00000504731 1122 ntBASIC16.28■□□□□ 0.2
CLCN2P51788 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN2P51788 STK19B-204ENST00000512515 211 ntBASIC16.28■□□□□ 0.2
CLCN2P51788 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN2P51788 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.28■□□□□ 0.2
CLCN2P51788 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.28■□□□□ 0.2
CLCN2P51788 AC073592.4-201ENST00000623827 446 ntBASIC16.28■□□□□ 0.2
CLCN2P51788 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLCN2P51788 AL022326.1-202ENST00000641533 845 ntBASIC16.28■□□□□ 0.2
CLCN2P51788 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLCN2P51788 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN2P51788 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCN2P51788 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CLCN2P51788 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 AC132938.5-201ENST00000624980 1813 ntBASIC16.27■□□□□ 0.2
CLCN2P51788 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLCN2P51788 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 AL031284.1-201ENST00000419297 478 ntBASIC16.27■□□□□ 0.2
CLCN2P51788 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLCN2P51788 BX005266.1-201ENST00000473402 457 ntBASIC16.27■□□□□ 0.2
CLCN2P51788 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCN2P51788 AC079776.4-201ENST00000511039 504 ntBASIC16.27■□□□□ 0.2
CLCN2P51788 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCN2P51788 MTDHP4-201ENST00000600287 670 ntBASIC16.27■□□□□ 0.2
CLCN2P51788 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLCN2P51788 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN2P51788 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CLCN2P51788 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN2P51788 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN2P51788 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
CLCN2P51788 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CLCN2P51788 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
CLCN2P51788 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CLCN2P51788 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN2P51788 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN2P51788 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN2P51788 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.27■□□□□ 0.19
CLCN2P51788 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.27■□□□□ 0.19
CLCN2P51788 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN2P51788 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CLCN2P51788 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN2P51788 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 HLA-A-201ENST00000376802 1334 ntBASIC16.26■□□□□ 0.19
CLCN2P51788 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN2P51788 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCN2P51788 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLCN2P51788 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 AC093525.9-201ENST00000624961 1746 ntBASIC16.26■□□□□ 0.19
CLCN2P51788 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLCN2P51788 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLCN2P51788 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCN2P51788 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLCN2P51788 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLCN2P51788 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.26■□□□□ 0.19
CLCN2P51788 PRYP5-201ENST00000451909 266 ntBASIC16.26■□□□□ 0.19
CLCN2P51788 SIGLEC30P-201ENST00000455569 941 ntBASIC16.26■□□□□ 0.19
CLCN2P51788 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.26■□□□□ 0.19
CLCN2P51788 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.26■□□□□ 0.19
CLCN2P51788 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN2P51788 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCN2P51788 STK25P1-201ENST00000585406 838 ntBASIC16.26■□□□□ 0.19
CLCN2P51788 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.26■□□□□ 0.19
CLCN2P51788 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms