Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.12■□□□□ 0.49
PDE6CP51160 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.12■□□□□ 0.49
PDE6CP51160 AC002347.1-201ENST00000569543 541 ntBASIC18.12■□□□□ 0.49
PDE6CP51160 GGTLC5P-201ENST00000617623 998 ntBASIC18.12■□□□□ 0.49
PDE6CP51160 AC139530.3-201ENST00000620344 690 ntBASIC18.12■□□□□ 0.49
PDE6CP51160 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE6CP51160 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
PDE6CP51160 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDE6CP51160 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE6CP51160 AC092171.3-201ENST00000610122 2651 ntBASIC18.12■□□□□ 0.49
PDE6CP51160 LINC00895-201ENST00000629028 1637 ntBASIC18.12■□□□□ 0.49
PDE6CP51160 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE6CP51160 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE6CP51160 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDE6CP51160 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDE6CP51160 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6CP51160 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 AL603756.1-201ENST00000606511 2163 ntBASIC18.11■□□□□ 0.49
PDE6CP51160 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 PCDHB19P-201ENST00000570871 2371 ntBASIC18.11■□□□□ 0.49
PDE6CP51160 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6CP51160 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PDE6CP51160 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PDE6CP51160 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 CRYGEP-201ENST00000412192 528 ntBASIC18.11■□□□□ 0.49
PDE6CP51160 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.11■□□□□ 0.49
PDE6CP51160 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6CP51160 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.11■□□□□ 0.49
PDE6CP51160 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.11■□□□□ 0.49
PDE6CP51160 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6CP51160 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PDE6CP51160 AC064836.3-201ENST00000607928 673 ntBASIC18.11■□□□□ 0.49
PDE6CP51160 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.11■□□□□ 0.49
PDE6CP51160 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PDE6CP51160 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6CP51160 PI4KAP1-204ENST00000612579 1703 ntBASIC18.11■□□□□ 0.49
PDE6CP51160 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE6CP51160 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.11■□□□□ 0.49
PDE6CP51160 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE6CP51160 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PDE6CP51160 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6CP51160 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6CP51160 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6CP51160 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6CP51160 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6CP51160 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
PDE6CP51160 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6CP51160 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PDE6CP51160 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6CP51160 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.1■□□□□ 0.49
PDE6CP51160 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6CP51160 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6CP51160 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6CP51160 PTCHD3P3-201ENST00000403073 906 ntBASIC18.1■□□□□ 0.49
PDE6CP51160 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.1■□□□□ 0.49
PDE6CP51160 AC007967.2-201ENST00000432613 625 ntBASIC18.1■□□□□ 0.49
PDE6CP51160 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6CP51160 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.1■□□□□ 0.49
PDE6CP51160 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PDE6CP51160 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6CP51160 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.1■□□□□ 0.49
PDE6CP51160 MIR3687-2-201ENST00000577708 61 ntBASIC18.1■□□□□ 0.49
PDE6CP51160 MIR3687-1-201ENST00000614492 61 ntBASIC18.1■□□□□ 0.49
PDE6CP51160 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.1■□□□□ 0.49
PDE6CP51160 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PDE6CP51160 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6CP51160 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6CP51160 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6CP51160 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.1■□□□□ 0.49
PDE6CP51160 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDE6CP51160 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDE6CP51160 HLA-A-202ENST00000376806 1854 ntBASIC18.09■□□□□ 0.49
PDE6CP51160 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDE6CP51160 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDE6CP51160 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDE6CP51160 AC011270.2-201ENST00000624293 2550 ntBASIC18.09■□□□□ 0.49
PDE6CP51160 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.09■□□□□ 0.49
PDE6CP51160 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms