Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3AP50213 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3AP50213 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3AP50213 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3AP50213 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3AP50213 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3AP50213 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IDH3AP50213 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
IDH3AP50213 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.3■□□□□ 0.2
IDH3AP50213 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
IDH3AP50213 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
IDH3AP50213 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 AL031731.1-201ENST00000642131 2094 ntBASIC16.3■□□□□ 0.2
IDH3AP50213 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.3■□□□□ 0.2
IDH3AP50213 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.3■□□□□ 0.2
IDH3AP50213 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 AL356309.3-201ENST00000624132 1934 ntBASIC16.3■□□□□ 0.2
IDH3AP50213 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IDH3AP50213 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
IDH3AP50213 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 SPDYE21P-201ENST00000413323 827 ntBASIC16.3■□□□□ 0.2
IDH3AP50213 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.3■□□□□ 0.2
IDH3AP50213 KRT18P57-201ENST00000443599 1254 ntBASIC16.3■□□□□ 0.2
IDH3AP50213 VENTXP7-201ENST00000475503 772 ntBASIC16.3■□□□□ 0.2
IDH3AP50213 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.3■□□□□ 0.2
IDH3AP50213 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.3■□□□□ 0.2
IDH3AP50213 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
IDH3AP50213 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.3■□□□□ 0.2
IDH3AP50213 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.3■□□□□ 0.2
IDH3AP50213 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.3■□□□□ 0.2
IDH3AP50213 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.3■□□□□ 0.2
IDH3AP50213 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.3■□□□□ 0.2
IDH3AP50213 AC133561.5-201ENST00000635547 218 ntBASIC16.3■□□□□ 0.2
IDH3AP50213 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.3■□□□□ 0.2
IDH3AP50213 AP000867.4-201ENST00000641616 219 ntBASIC16.3■□□□□ 0.2
IDH3AP50213 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.3■□□□□ 0.2
IDH3AP50213 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
IDH3AP50213 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
IDH3AP50213 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.3■□□□□ 0.2
IDH3AP50213 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 AC073347.1-201ENST00000421633 2643 ntBASIC16.3■□□□□ 0.2
IDH3AP50213 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IDH3AP50213 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
IDH3AP50213 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.29■□□□□ 0.2
IDH3AP50213 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.29■□□□□ 0.2
IDH3AP50213 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
IDH3AP50213 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
IDH3AP50213 AC022532.1-201ENST00000624563 1728 ntBASIC16.29■□□□□ 0.2
IDH3AP50213 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.29■□□□□ 0.2
IDH3AP50213 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 AL671277.2-201ENST00000458060 996 ntBASIC16.29■□□□□ 0.2
IDH3AP50213 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.29■□□□□ 0.2
IDH3AP50213 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
IDH3AP50213 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.29■□□□□ 0.2
IDH3AP50213 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
IDH3AP50213 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3AP50213 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3AP50213 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IDH3AP50213 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms