Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.88■□□□□ 0.45
SSR1P43307 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.88■□□□□ 0.45
SSR1P43307 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SSR1P43307 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
SSR1P43307 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.87■□□□□ 0.45
SSR1P43307 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SSR1P43307 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.87■□□□□ 0.45
SSR1P43307 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.87■□□□□ 0.45
SSR1P43307 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.87■□□□□ 0.45
SSR1P43307 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.87■□□□□ 0.45
SSR1P43307 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.87■□□□□ 0.45
SSR1P43307 AC106795.1-205ENST00000512851 1056 ntBASIC17.87■□□□□ 0.45
SSR1P43307 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
SSR1P43307 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.87■□□□□ 0.45
SSR1P43307 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.87■□□□□ 0.45
SSR1P43307 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.87■□□□□ 0.45
SSR1P43307 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.87■□□□□ 0.45
SSR1P43307 AL022326.1-202ENST00000641533 845 ntBASIC17.87■□□□□ 0.45
SSR1P43307 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SSR1P43307 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SSR1P43307 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SSR1P43307 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SSR1P43307 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.87■□□□□ 0.45
SSR1P43307 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.87■□□□□ 0.45
SSR1P43307 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 AC067930.6-201ENST00000623257 4947 ntBASIC17.87■□□□□ 0.45
SSR1P43307 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSR1P43307 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.87■□□□□ 0.45
SSR1P43307 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.87■□□□□ 0.45
SSR1P43307 MIR600HG-201ENST00000449175 5984 ntBASIC17.86■□□□□ 0.45
SSR1P43307 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SSR1P43307 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
SSR1P43307 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.86■□□□□ 0.45
SSR1P43307 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.86■□□□□ 0.45
SSR1P43307 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 RBM17P3-201ENST00000417687 1192 ntBASIC17.86■□□□□ 0.45
SSR1P43307 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.86■□□□□ 0.45
SSR1P43307 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.86■□□□□ 0.45
SSR1P43307 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.86■□□□□ 0.45
SSR1P43307 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SSR1P43307 LINC01711-201ENST00000598340 967 ntBASIC17.86■□□□□ 0.45
SSR1P43307 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.86■□□□□ 0.45
SSR1P43307 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 AL021920.2-201ENST00000624828 1351 ntBASIC17.86■□□□□ 0.45
SSR1P43307 AL662844.4-201ENST00000606367 2838 ntBASIC17.86■□□□□ 0.45
SSR1P43307 NCF1C-201ENST00000438382 1427 ntBASIC17.86■□□□□ 0.45
SSR1P43307 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.86■□□□□ 0.45
SSR1P43307 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.86■□□□□ 0.45
SSR1P43307 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SSR1P43307 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SSR1P43307 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SSR1P43307 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.86■□□□□ 0.45
SSR1P43307 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSR1P43307 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.85■□□□□ 0.45
SSR1P43307 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms