Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.32■□□□□ 0.2
GDF5P43026 DOC2GP-204ENST00000639052 2548 ntBASIC16.32■□□□□ 0.2
GDF5P43026 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GDF5P43026 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
GDF5P43026 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
GDF5P43026 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF5P43026 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
GDF5P43026 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF5P43026 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GDF5P43026 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GDF5P43026 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GDF5P43026 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.31■□□□□ 0.2
GDF5P43026 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.31■□□□□ 0.2
GDF5P43026 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 AL512652.2-201ENST00000625156 1716 ntBASIC16.31■□□□□ 0.2
GDF5P43026 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.31■□□□□ 0.2
GDF5P43026 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.31■□□□□ 0.2
GDF5P43026 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.31■□□□□ 0.2
GDF5P43026 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GDF5P43026 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GDF5P43026 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
GDF5P43026 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
GDF5P43026 RNA5SP419-201ENST00000515908 135 ntBASIC16.31■□□□□ 0.2
GDF5P43026 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
GDF5P43026 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.31■□□□□ 0.2
GDF5P43026 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.31■□□□□ 0.2
GDF5P43026 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.31■□□□□ 0.2
GDF5P43026 AC116407.3-201ENST00000623905 1129 ntBASIC16.31■□□□□ 0.2
GDF5P43026 PGM5P2-202ENST00000637225 1043 ntBASIC16.31■□□□□ 0.2
GDF5P43026 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GDF5P43026 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.31■□□□□ 0.2
GDF5P43026 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF5P43026 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.31■□□□□ 0.2
GDF5P43026 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.3■□□□□ 0.2
GDF5P43026 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GDF5P43026 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.3■□□□□ 0.2
GDF5P43026 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GDF5P43026 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GDF5P43026 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
GDF5P43026 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.3■□□□□ 0.2
GDF5P43026 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GDF5P43026 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
GDF5P43026 AC129492.6-201ENST00000611383 1305 ntBASIC16.3■□□□□ 0.2
GDF5P43026 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.3■□□□□ 0.2
GDF5P43026 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.3■□□□□ 0.2
GDF5P43026 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.3■□□□□ 0.2
GDF5P43026 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.3■□□□□ 0.2
GDF5P43026 AC091167.2-201ENST00000579581 588 ntBASIC16.3■□□□□ 0.2
GDF5P43026 SLC25A6P4-201ENST00000586535 553 ntBASIC16.3■□□□□ 0.2
GDF5P43026 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.3■□□□□ 0.2
GDF5P43026 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.3■□□□□ 0.2
GDF5P43026 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 AL139011.1-202ENST00000642063 584 ntBASIC16.3■□□□□ 0.2
GDF5P43026 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
GDF5P43026 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.3■□□□□ 0.2
GDF5P43026 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GDF5P43026 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.3■□□□□ 0.2
GDF5P43026 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.3■□□□□ 0.2
GDF5P43026 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.3■□□□□ 0.2
GDF5P43026 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDF5P43026 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF5P43026 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF5P43026 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GDF5P43026 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF5P43026 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF5P43026 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.29■□□□□ 0.2
GDF5P43026 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GDF5P43026 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF5P43026 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GDF5P43026 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GDF5P43026 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.29■□□□□ 0.2
GDF5P43026 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
GDF5P43026 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GDF5P43026 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms