Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HOXC12P31275 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.87□□□□□ -0.03
HOXC12P31275 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HOXC12P31275 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 MST1L-201ENST00000442552 2185 ntBASIC14.87□□□□□ -0.03
HOXC12P31275 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.87□□□□□ -0.03
HOXC12P31275 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
HOXC12P31275 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.87□□□□□ -0.03
HOXC12P31275 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HOXC12P31275 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.87□□□□□ -0.03
HOXC12P31275 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.87□□□□□ -0.03
HOXC12P31275 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HOXC12P31275 AL513480.1-201ENST00000451731 511 ntBASIC14.87□□□□□ -0.03
HOXC12P31275 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.87□□□□□ -0.03
HOXC12P31275 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.87□□□□□ -0.03
HOXC12P31275 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.87□□□□□ -0.03
HOXC12P31275 AC096734.2-201ENST00000562054 433 ntBASIC14.87□□□□□ -0.03
HOXC12P31275 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.87□□□□□ -0.03
HOXC12P31275 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.87□□□□□ -0.03
HOXC12P31275 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.87□□□□□ -0.03
HOXC12P31275 AC023141.13-201ENST00000604991 943 ntBASIC14.87□□□□□ -0.03
HOXC12P31275 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.87□□□□□ -0.03
HOXC12P31275 AC010507.1-201ENST00000633895 436 ntBASIC14.87□□□□□ -0.03
HOXC12P31275 AC141586.5-201ENST00000624546 2050 ntBASIC14.87□□□□□ -0.03
HOXC12P31275 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HOXC12P31275 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
HOXC12P31275 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HOXC12P31275 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 TUBB8P12-201ENST00000308911 1335 ntBASIC14.87□□□□□ -0.03
HOXC12P31275 TUBB7P-202ENST00000428444 1305 ntBASIC14.87□□□□□ -0.03
HOXC12P31275 TUBB8P7-204ENST00000567960 1332 ntBASIC14.87□□□□□ -0.03
HOXC12P31275 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HOXC12P31275 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.87□□□□□ -0.03
HOXC12P31275 PCDHB18P-201ENST00000524813 2368 ntBASIC14.87□□□□□ -0.03
HOXC12P31275 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC12P31275 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HOXC12P31275 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC12P31275 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HOXC12P31275 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC12P31275 BCRP1-201ENST00000444246 691 ntBASIC14.86□□□□□ -0.03
HOXC12P31275 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 AC124947.2-201ENST00000547118 1133 ntBASIC14.86□□□□□ -0.03
HOXC12P31275 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.86□□□□□ -0.03
HOXC12P31275 AL031432.2-201ENST00000566714 459 ntBASIC14.86□□□□□ -0.03
HOXC12P31275 AL928711.1-201ENST00000570165 459 ntBASIC14.86□□□□□ -0.03
HOXC12P31275 AC005412.3-201ENST00000580309 715 ntBASIC14.86□□□□□ -0.03
HOXC12P31275 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.86□□□□□ -0.03
HOXC12P31275 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
HOXC12P31275 AC093028.1-201ENST00000622998 982 ntBASIC14.86□□□□□ -0.03
HOXC12P31275 AP001350.2-201ENST00000625104 1094 ntBASIC14.86□□□□□ -0.03
HOXC12P31275 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.86□□□□□ -0.03
HOXC12P31275 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC12P31275 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC12P31275 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
HOXC12P31275 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 BCAR1-209ENST00000546196 1340 ntBASIC14.86□□□□□ -0.03
HOXC12P31275 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
HOXC12P31275 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC12P31275 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HOXC12P31275 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.86□□□□□ -0.03
HOXC12P31275 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HOXC12P31275 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
HOXC12P31275 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC12P31275 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HOXC12P31275 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HOXC12P31275 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HOXC12P31275 AL513477.1-201ENST00000602865 2407 ntBASIC14.85□□□□□ -0.03
HOXC12P31275 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
HOXC12P31275 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HOXC12P31275 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms