Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC8P31273 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC8P31273 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HOXC8P31273 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HOXC8P31273 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
HOXC8P31273 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC8P31273 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXC8P31273 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC8P31273 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC8P31273 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXC8P31273 AC139713.2-201ENST00000641328 2723 ntBASIC18.05■□□□□ 0.48
HOXC8P31273 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HOXC8P31273 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
HOXC8P31273 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC8P31273 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC8P31273 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC8P31273 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC8P31273 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.04■□□□□ 0.48
HOXC8P31273 AC006538.1-201ENST00000567905 1585 ntBASIC18.04■□□□□ 0.48
HOXC8P31273 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXC8P31273 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXC8P31273 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC8P31273 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXC8P31273 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC8P31273 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HOXC8P31273 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HOXC8P31273 AC007541.1-201ENST00000570282 1469 ntBASIC18.04■□□□□ 0.48
HOXC8P31273 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HOXC8P31273 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC8P31273 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HOXC8P31273 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.04■□□□□ 0.48
HOXC8P31273 DFFBP1-201ENST00000433250 979 ntBASIC18.04■□□□□ 0.48
HOXC8P31273 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXC8P31273 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.04■□□□□ 0.48
HOXC8P31273 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.04■□□□□ 0.48
HOXC8P31273 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC8P31273 AC104794.3-201ENST00000566840 1248 ntBASIC18.04■□□□□ 0.48
HOXC8P31273 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXC8P31273 AC140912.1-201ENST00000577171 1054 ntBASIC18.04■□□□□ 0.48
HOXC8P31273 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXC8P31273 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HOXC8P31273 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.04■□□□□ 0.48
HOXC8P31273 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC8P31273 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC8P31273 AC018470.1-201ENST00000624790 3129 ntBASIC18.04■□□□□ 0.48
HOXC8P31273 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.04■□□□□ 0.48
HOXC8P31273 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.03■□□□□ 0.48
HOXC8P31273 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC8P31273 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HOXC8P31273 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HOXC8P31273 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC8P31273 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HOXC8P31273 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC8P31273 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.03■□□□□ 0.48
HOXC8P31273 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.03■□□□□ 0.48
HOXC8P31273 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
HOXC8P31273 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 SPDYE18-201ENST00000510091 1050 ntBASIC18.03■□□□□ 0.48
HOXC8P31273 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.03■□□□□ 0.48
HOXC8P31273 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC8P31273 AC044860.1-202ENST00000559481 777 ntBASIC18.03■□□□□ 0.48
HOXC8P31273 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
HOXC8P31273 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC8P31273 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.03■□□□□ 0.48
HOXC8P31273 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.03■□□□□ 0.48
HOXC8P31273 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HOXC8P31273 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HOXC8P31273 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.03■□□□□ 0.48
HOXC8P31273 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HOXC8P31273 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
HOXC8P31273 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC8P31273 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC8P31273 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC8P31273 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC8P31273 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC8P31273 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC8P31273 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC8P31273 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC8P31273 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC8P31273 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC8P31273 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC8P31273 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC8P31273 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms