Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO1P25800 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
LMO1P25800 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.08□□□□□ -0.16
LMO1P25800 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
LMO1P25800 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 AL356488.2-201ENST00000602755 427 ntBASIC14.08□□□□□ -0.16
LMO1P25800 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LMO1P25800 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO1P25800 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO1P25800 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.08□□□□□ -0.16
LMO1P25800 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
LMO1P25800 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LMO1P25800 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.08□□□□□ -0.16
LMO1P25800 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO1P25800 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.07□□□□□ -0.16
LMO1P25800 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
LMO1P25800 AC132872.4-202ENST00000622924 2756 ntBASIC14.07□□□□□ -0.16
LMO1P25800 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LMO1P25800 AC004870.1-201ENST00000315132 882 ntBASIC14.07□□□□□ -0.16
LMO1P25800 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.07□□□□□ -0.16
LMO1P25800 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.07□□□□□ -0.16
LMO1P25800 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.07□□□□□ -0.16
LMO1P25800 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.07□□□□□ -0.16
LMO1P25800 AC107918.2-201ENST00000530817 355 ntBASIC14.07□□□□□ -0.16
LMO1P25800 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.07□□□□□ -0.16
LMO1P25800 AC005412.3-201ENST00000580309 715 ntBASIC14.07□□□□□ -0.16
LMO1P25800 RN7SL510P-201ENST00000581311 263 ntBASIC14.07□□□□□ -0.16
LMO1P25800 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
LMO1P25800 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.07□□□□□ -0.16
LMO1P25800 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.07□□□□□ -0.16
LMO1P25800 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO1P25800 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LMO1P25800 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LMO1P25800 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
LMO1P25800 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LMO1P25800 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
LMO1P25800 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.06□□□□□ -0.16
LMO1P25800 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LMO1P25800 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LMO1P25800 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.06□□□□□ -0.16
LMO1P25800 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LMO1P25800 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LMO1P25800 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
LMO1P25800 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LMO1P25800 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LMO1P25800 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LMO1P25800 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.06□□□□□ -0.16
LMO1P25800 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LMO1P25800 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LMO1P25800 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LMO1P25800 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.06□□□□□ -0.16
LMO1P25800 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LMO1P25800 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.06□□□□□ -0.16
LMO1P25800 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.06□□□□□ -0.16
LMO1P25800 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.06□□□□□ -0.16
LMO1P25800 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LMO1P25800 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.06□□□□□ -0.16
LMO1P25800 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.06□□□□□ -0.16
LMO1P25800 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.06□□□□□ -0.16
LMO1P25800 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.06□□□□□ -0.16
LMO1P25800 AC005593.1-201ENST00000624894 515 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms