Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.55■□□□□ 0.08
UBL4AP11441 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
UBL4AP11441 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.55■□□□□ 0.08
UBL4AP11441 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.55■□□□□ 0.08
UBL4AP11441 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.55■□□□□ 0.08
UBL4AP11441 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
UBL4AP11441 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.55■□□□□ 0.08
UBL4AP11441 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.55■□□□□ 0.08
UBL4AP11441 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.55■□□□□ 0.08
UBL4AP11441 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.55■□□□□ 0.08
UBL4AP11441 AC104692.2-201ENST00000603054 253 ntBASIC15.55■□□□□ 0.08
UBL4AP11441 GGTLC5P-201ENST00000617623 998 ntBASIC15.55■□□□□ 0.08
UBL4AP11441 AC005593.1-201ENST00000624894 515 ntBASIC15.55■□□□□ 0.08
UBL4AP11441 FAM215A-202ENST00000632077 792 ntBASIC15.55■□□□□ 0.08
UBL4AP11441 PGM5P2-202ENST00000637225 1043 ntBASIC15.55■□□□□ 0.08
UBL4AP11441 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.55■□□□□ 0.08
UBL4AP11441 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 AC008741.2-201ENST00000612792 3115 ntBASIC15.55■□□□□ 0.08
UBL4AP11441 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
UBL4AP11441 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
UBL4AP11441 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBL4AP11441 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.54■□□□□ 0.08
UBL4AP11441 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UBL4AP11441 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 AP002414.3-201ENST00000589352 1468 ntBASIC15.54■□□□□ 0.08
UBL4AP11441 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.54■□□□□ 0.08
UBL4AP11441 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
UBL4AP11441 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
UBL4AP11441 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.54■□□□□ 0.08
UBL4AP11441 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.54■□□□□ 0.08
UBL4AP11441 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.54■□□□□ 0.08
UBL4AP11441 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
UBL4AP11441 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 AC012640.2-201ENST00000561606 901 ntBASIC15.54■□□□□ 0.08
UBL4AP11441 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.54■□□□□ 0.08
UBL4AP11441 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UBL4AP11441 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.54■□□□□ 0.08
UBL4AP11441 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.54■□□□□ 0.08
UBL4AP11441 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBL4AP11441 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.54■□□□□ 0.08
UBL4AP11441 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.53■□□□□ 0.08
UBL4AP11441 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.53■□□□□ 0.08
UBL4AP11441 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBL4AP11441 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.53■□□□□ 0.08
UBL4AP11441 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.53■□□□□ 0.08
UBL4AP11441 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 AC078925.2-201ENST00000624013 1973 ntBASIC15.53■□□□□ 0.08
UBL4AP11441 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBL4AP11441 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms