Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.39■□□□□ 0.53
EPB41P11171 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.39■□□□□ 0.53
EPB41P11171 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPB41P11171 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.39■□□□□ 0.53
EPB41P11171 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPB41P11171 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.39■□□□□ 0.53
EPB41P11171 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPB41P11171 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
EPB41P11171 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EPB41P11171 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EPB41P11171 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
EPB41P11171 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EPB41P11171 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.39■□□□□ 0.53
EPB41P11171 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.39■□□□□ 0.53
EPB41P11171 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
EPB41P11171 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.38■□□□□ 0.53
EPB41P11171 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
EPB41P11171 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
EPB41P11171 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 AC131009.4-201ENST00000624048 1740 ntBASIC18.38■□□□□ 0.53
EPB41P11171 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
EPB41P11171 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.38■□□□□ 0.53
EPB41P11171 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
EPB41P11171 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.38■□□□□ 0.53
EPB41P11171 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
EPB41P11171 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.38■□□□□ 0.53
EPB41P11171 MRPL20P1-201ENST00000400819 433 ntBASIC18.38■□□□□ 0.53
EPB41P11171 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.38■□□□□ 0.53
EPB41P11171 AL031284.1-201ENST00000419297 478 ntBASIC18.38■□□□□ 0.53
EPB41P11171 AC092910.1-201ENST00000482027 1129 ntBASIC18.38■□□□□ 0.53
EPB41P11171 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.38■□□□□ 0.53
EPB41P11171 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.38■□□□□ 0.53
EPB41P11171 MIR4492-201ENST00000581627 80 ntBASIC18.38■□□□□ 0.53
EPB41P11171 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
EPB41P11171 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
EPB41P11171 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
EPB41P11171 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
EPB41P11171 AL353732.1-201ENST00000569618 1459 ntBASIC18.38■□□□□ 0.53
EPB41P11171 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EPB41P11171 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.38■□□□□ 0.53
EPB41P11171 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
EPB41P11171 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
EPB41P11171 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
EPB41P11171 PCDHA1-201ENST00000378133 2726 ntBASIC18.37■□□□□ 0.53
EPB41P11171 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPB41P11171 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPB41P11171 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPB41P11171 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPB41P11171 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.37■□□□□ 0.53
EPB41P11171 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.37■□□□□ 0.53
EPB41P11171 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
EPB41P11171 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
EPB41P11171 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPB41P11171 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EPB41P11171 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.37■□□□□ 0.53
EPB41P11171 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.37■□□□□ 0.53
EPB41P11171 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.37■□□□□ 0.53
EPB41P11171 AC108073.2-201ENST00000464002 357 ntBASIC18.37■□□□□ 0.53
EPB41P11171 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.37■□□□□ 0.53
EPB41P11171 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.37■□□□□ 0.53
EPB41P11171 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.37■□□□□ 0.53
EPB41P11171 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.37■□□□□ 0.53
EPB41P11171 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.37■□□□□ 0.53
EPB41P11171 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EPB41P11171 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.37■□□□□ 0.53
EPB41P11171 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.37■□□□□ 0.53
EPB41P11171 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.37■□□□□ 0.53
EPB41P11171 AC117500.6-201ENST00000624871 588 ntBASIC18.37■□□□□ 0.53
EPB41P11171 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.37■□□□□ 0.53
EPB41P11171 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
EPB41P11171 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.37■□□□□ 0.53
EPB41P11171 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
EPB41P11171 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
EPB41P11171 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EPB41P11171 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EPB41P11171 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPB41P11171 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EPB41P11171 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPB41P11171 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
EPB41P11171 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPB41P11171 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPB41P11171 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
EPB41P11171 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPB41P11171 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPB41P11171 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EPB41P11171 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPB41P11171 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EPB41P11171 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms