Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPRFP10586 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPRFP10586 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPRFP10586 AL645728.1-201ENST00000366221 2101 ntBASIC18.92■□□□□ 0.62
PTPRFP10586 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPRFP10586 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPRFP10586 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PTPRFP10586 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPRFP10586 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPRFP10586 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PTPRFP10586 AL589702.1-201ENST00000641229 1509 ntBASIC18.92■□□□□ 0.62
PTPRFP10586 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
PTPRFP10586 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPRFP10586 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPRFP10586 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPRFP10586 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PTPRFP10586 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPRFP10586 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPRFP10586 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPRFP10586 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPRFP10586 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPRFP10586 RRP7BP-205ENST00000566851 833 ntBASIC18.91■□□□□ 0.62
PTPRFP10586 CTBP2P3-201ENST00000585629 1255 ntBASIC18.91■□□□□ 0.62
PTPRFP10586 AL606495.2-201ENST00000605867 535 ntBASIC18.91■□□□□ 0.62
PTPRFP10586 RPSAP52-203ENST00000622976 1023 ntBASIC18.91■□□□□ 0.62
PTPRFP10586 AC068880.1-201ENST00000507289 2297 ntBASIC18.91■□□□□ 0.62
PTPRFP10586 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPRFP10586 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPRFP10586 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPRFP10586 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPRFP10586 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPRFP10586 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPRFP10586 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPRFP10586 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPRFP10586 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPRFP10586 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.9■□□□□ 0.62
PTPRFP10586 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPRFP10586 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPRFP10586 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.9■□□□□ 0.62
PTPRFP10586 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.9■□□□□ 0.62
PTPRFP10586 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPRFP10586 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPRFP10586 AC022494.1-201ENST00000466044 728 ntBASIC18.9■□□□□ 0.62
PTPRFP10586 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 KRT17P8-201ENST00000540749 863 ntBASIC18.9■□□□□ 0.62
PTPRFP10586 AC123567.1-201ENST00000548294 1261 ntBASIC18.9■□□□□ 0.62
PTPRFP10586 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPRFP10586 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PTPRFP10586 AL512652.2-201ENST00000625156 1716 ntBASIC18.9■□□□□ 0.62
PTPRFP10586 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPRFP10586 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPRFP10586 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPRFP10586 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PTPRFP10586 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPRFP10586 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.9■□□□□ 0.62
PTPRFP10586 AC020765.3-201ENST00000613051 740 ntBASIC18.9■□□□□ 0.62
PTPRFP10586 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPRFP10586 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PTPRFP10586 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PTPRFP10586 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTPRFP10586 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.89■□□□□ 0.62
PTPRFP10586 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PTPRFP10586 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.89■□□□□ 0.62
PTPRFP10586 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PTPRFP10586 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PTPRFP10586 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPRFP10586 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
PTPRFP10586 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPRFP10586 ANKRD19P-201ENST00000338192 862 ntBASIC18.89■□□□□ 0.61
PTPRFP10586 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPRFP10586 EEF1DP4-201ENST00000446006 880 ntBASIC18.89■□□□□ 0.61
PTPRFP10586 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.89■□□□□ 0.61
PTPRFP10586 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.89■□□□□ 0.61
PTPRFP10586 WFDC1-204ENST00000613603 549 ntBASIC18.89■□□□□ 0.61
PTPRFP10586 AL162274.1-201ENST00000617191 1098 ntBASIC18.89■□□□□ 0.61
PTPRFP10586 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.89■□□□□ 0.61
PTPRFP10586 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PTPRFP10586 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPRFP10586 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
PTPRFP10586 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPRFP10586 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
PTPRFP10586 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPRFP10586 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPRFP10586 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms