Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.74■□□□□ 0.59
CYP3A4P08684 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.74■□□□□ 0.59
CYP3A4P08684 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.74■□□□□ 0.59
CYP3A4P08684 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 PRYP6-201ENST00000514804 343 ntBASIC18.74■□□□□ 0.59
CYP3A4P08684 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.74■□□□□ 0.59
CYP3A4P08684 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.74■□□□□ 0.59
CYP3A4P08684 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.74■□□□□ 0.59
CYP3A4P08684 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.74■□□□□ 0.59
CYP3A4P08684 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.74■□□□□ 0.59
CYP3A4P08684 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 FOXO1B-201ENST00000504678 1527 ntBASIC18.74■□□□□ 0.59
CYP3A4P08684 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.74■□□□□ 0.59
CYP3A4P08684 KRT18P28-201ENST00000453838 1332 ntBASIC18.74■□□□□ 0.59
CYP3A4P08684 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYP3A4P08684 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.73■□□□□ 0.59
CYP3A4P08684 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.73■□□□□ 0.59
CYP3A4P08684 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
CYP3A4P08684 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CYP3A4P08684 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CYP3A4P08684 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.73■□□□□ 0.59
CYP3A4P08684 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.73■□□□□ 0.59
CYP3A4P08684 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.73■□□□□ 0.59
CYP3A4P08684 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CYP3A4P08684 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.73■□□□□ 0.59
CYP3A4P08684 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.73■□□□□ 0.59
CYP3A4P08684 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.73■□□□□ 0.59
CYP3A4P08684 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.73■□□□□ 0.59
CYP3A4P08684 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.73■□□□□ 0.59
CYP3A4P08684 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.73■□□□□ 0.59
CYP3A4P08684 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CYP3A4P08684 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CYP3A4P08684 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CYP3A4P08684 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.72■□□□□ 0.59
CYP3A4P08684 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.72■□□□□ 0.59
CYP3A4P08684 TSEN15P1-201ENST00000423257 515 ntBASIC18.72■□□□□ 0.59
CYP3A4P08684 KRT18P32-201ENST00000424695 1287 ntBASIC18.72■□□□□ 0.59
CYP3A4P08684 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.72■□□□□ 0.59
CYP3A4P08684 AC093724.1-201ENST00000448659 1027 ntBASIC18.72■□□□□ 0.59
CYP3A4P08684 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.72■□□□□ 0.59
CYP3A4P08684 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.72■□□□□ 0.59
CYP3A4P08684 SLC25A39P2-201ENST00000537614 270 ntBASIC18.72■□□□□ 0.59
CYP3A4P08684 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.72■□□□□ 0.59
CYP3A4P08684 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.72■□□□□ 0.59
CYP3A4P08684 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.72■□□□□ 0.59
CYP3A4P08684 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.72■□□□□ 0.59
CYP3A4P08684 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 UXT-AS1-201ENST00000590504 1525 ntBASIC18.72■□□□□ 0.59
CYP3A4P08684 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.72■□□□□ 0.59
CYP3A4P08684 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CYP3A4P08684 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CYP3A4P08684 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CYP3A4P08684 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.71■□□□□ 0.59
CYP3A4P08684 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.71■□□□□ 0.59
CYP3A4P08684 LINC01144-201ENST00000626198 1710 ntBASIC18.71■□□□□ 0.59
CYP3A4P08684 PCGF3-213ENST00000620529 1899 ntBASIC18.71■□□□□ 0.59
CYP3A4P08684 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.71■□□□□ 0.59
CYP3A4P08684 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.71■□□□□ 0.59
CYP3A4P08684 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.71■□□□□ 0.59
CYP3A4P08684 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.71■□□□□ 0.59
CYP3A4P08684 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CYP3A4P08684 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CYP3A4P08684 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CYP3A4P08684 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CYP3A4P08684 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CYP3A4P08684 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.71■□□□□ 0.59
CYP3A4P08684 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.71■□□□□ 0.59
CYP3A4P08684 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.71■□□□□ 0.59
CYP3A4P08684 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CYP3A4P08684 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms