Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.57■□□□□ 0.4
RB1P06400 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
RB1P06400 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RB1P06400 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RB1P06400 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.56■□□□□ 0.4
RB1P06400 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RB1P06400 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.56■□□□□ 0.4
RB1P06400 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.56■□□□□ 0.4
RB1P06400 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.56■□□□□ 0.4
RB1P06400 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RB1P06400 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.56■□□□□ 0.4
RB1P06400 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.56■□□□□ 0.4
RB1P06400 AC044860.1-202ENST00000559481 777 ntBASIC17.56■□□□□ 0.4
RB1P06400 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.56■□□□□ 0.4
RB1P06400 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.56■□□□□ 0.4
RB1P06400 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.56■□□□□ 0.4
RB1P06400 AC024267.1-201ENST00000582320 895 ntBASIC17.56■□□□□ 0.4
RB1P06400 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RB1P06400 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.56■□□□□ 0.4
RB1P06400 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.56■□□□□ 0.4
RB1P06400 AC013467.2-201ENST00000605472 835 ntBASIC17.56■□□□□ 0.4
RB1P06400 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.56■□□□□ 0.4
RB1P06400 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.56■□□□□ 0.4
RB1P06400 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
RB1P06400 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RB1P06400 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.56■□□□□ 0.4
RB1P06400 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RB1P06400 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.55■□□□□ 0.4
RB1P06400 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RB1P06400 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RB1P06400 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RB1P06400 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RB1P06400 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RB1P06400 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.55■□□□□ 0.4
RB1P06400 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RB1P06400 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.55■□□□□ 0.4
RB1P06400 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RB1P06400 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.55■□□□□ 0.4
RB1P06400 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.55■□□□□ 0.4
RB1P06400 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.55■□□□□ 0.4
RB1P06400 AC007431.3-201ENST00000623221 587 ntBASIC17.55■□□□□ 0.4
RB1P06400 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.55■□□□□ 0.4
RB1P06400 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RB1P06400 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RB1P06400 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RB1P06400 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RB1P06400 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RB1P06400 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RB1P06400 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RB1P06400 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RB1P06400 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
RB1P06400 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RB1P06400 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.54■□□□□ 0.4
RB1P06400 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.54■□□□□ 0.4
RB1P06400 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.54■□□□□ 0.4
RB1P06400 MIR658-201ENST00000385210 100 ntBASIC17.54■□□□□ 0.4
RB1P06400 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RB1P06400 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 SDHAP3-202ENST00000515467 728 ntBASIC17.54■□□□□ 0.4
RB1P06400 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.54■□□□□ 0.4
RB1P06400 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.54■□□□□ 0.4
RB1P06400 AC099568.2-201ENST00000609194 695 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms