Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MT-ND3P03897 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MT-ND3P03897 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MT-ND3P03897 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND3P03897 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
MT-ND3P03897 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.12■□□□□ 0.33
MT-ND3P03897 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.12■□□□□ 0.33
MT-ND3P03897 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.12■□□□□ 0.33
MT-ND3P03897 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
MT-ND3P03897 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND3P03897 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.12■□□□□ 0.33
MT-ND3P03897 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND3P03897 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.12■□□□□ 0.33
MT-ND3P03897 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.12■□□□□ 0.33
MT-ND3P03897 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
MT-ND3P03897 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND3P03897 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
MT-ND3P03897 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND3P03897 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MT-ND3P03897 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND3P03897 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND3P03897 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
MT-ND3P03897 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.11■□□□□ 0.33
MT-ND3P03897 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 AC132872.4-202ENST00000622924 2756 ntBASIC17.11■□□□□ 0.33
MT-ND3P03897 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.11■□□□□ 0.33
MT-ND3P03897 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.11■□□□□ 0.33
MT-ND3P03897 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.11■□□□□ 0.33
MT-ND3P03897 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.11■□□□□ 0.33
MT-ND3P03897 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 AC005336.2-201ENST00000593183 939 ntBASIC17.11■□□□□ 0.33
MT-ND3P03897 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MT-ND3P03897 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND3P03897 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
MT-ND3P03897 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND3P03897 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MT-ND3P03897 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND3P03897 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.1■□□□□ 0.33
MT-ND3P03897 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND3P03897 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-ND3P03897 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms