Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE6O95741 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE6O95741 AC004835.2-201ENST00000603762 682 ntBASIC16.46■□□□□ 0.23
CPNE6O95741 AC027612.4-201ENST00000605371 583 ntBASIC16.46■□□□□ 0.23
CPNE6O95741 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE6O95741 AL513210.1-201ENST00000629608 234 ntBASIC16.46■□□□□ 0.23
CPNE6O95741 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CPNE6O95741 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE6O95741 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CPNE6O95741 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.46■□□□□ 0.23
CPNE6O95741 LYSMD4-203ENST00000378904 2122 ntBASIC16.46■□□□□ 0.23
CPNE6O95741 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CPNE6O95741 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE6O95741 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CPNE6O95741 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE6O95741 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE6O95741 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE6O95741 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
CPNE6O95741 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.45■□□□□ 0.22
CPNE6O95741 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.45■□□□□ 0.22
CPNE6O95741 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE6O95741 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE6O95741 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE6O95741 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CPNE6O95741 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE6O95741 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.45■□□□□ 0.22
CPNE6O95741 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CPNE6O95741 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CPNE6O95741 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE6O95741 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.45■□□□□ 0.22
CPNE6O95741 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE6O95741 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CPNE6O95741 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.44■□□□□ 0.22
CPNE6O95741 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE6O95741 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE6O95741 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CPNE6O95741 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 TSEN15P1-201ENST00000423257 515 ntBASIC16.44■□□□□ 0.22
CPNE6O95741 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CPNE6O95741 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CPNE6O95741 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE6O95741 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.44■□□□□ 0.22
CPNE6O95741 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.44■□□□□ 0.22
CPNE6O95741 AC105339.1-204ENST00000636249 355 ntBASIC16.44■□□□□ 0.22
CPNE6O95741 AL645728.2-201ENST00000641974 660 ntBASIC16.44■□□□□ 0.22
CPNE6O95741 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE6O95741 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE6O95741 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
CPNE6O95741 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE6O95741 AC092919.2-201ENST00000623631 1645 ntBASIC16.44■□□□□ 0.22
CPNE6O95741 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CPNE6O95741 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CPNE6O95741 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE6O95741 AL603756.1-201ENST00000606511 2163 ntBASIC16.44■□□□□ 0.22
CPNE6O95741 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE6O95741 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE6O95741 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE6O95741 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CPNE6O95741 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE6O95741 LINC02199-201ENST00000506655 2702 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms