Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 AL359258.3-201ENST00000622910 2331 ntBASIC14.06□□□□□ -0.16
SIX6O95475 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.06□□□□□ -0.16
SIX6O95475 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.06□□□□□ -0.16
SIX6O95475 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.06□□□□□ -0.16
SIX6O95475 AC109462.3-201ENST00000573934 613 ntBASIC14.06□□□□□ -0.16
SIX6O95475 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.06□□□□□ -0.16
SIX6O95475 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.06□□□□□ -0.16
SIX6O95475 CD177P1-201ENST00000606252 935 ntBASIC14.06□□□□□ -0.16
SIX6O95475 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.06□□□□□ -0.16
SIX6O95475 AL109923.1-201ENST00000618799 583 ntBASIC14.06□□□□□ -0.16
SIX6O95475 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.06□□□□□ -0.16
SIX6O95475 AC026748.1-201ENST00000624349 3251 ntBASIC14.06□□□□□ -0.16
SIX6O95475 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 AC106881.1-201ENST00000605849 3329 ntBASIC14.06□□□□□ -0.16
SIX6O95475 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.06□□□□□ -0.16
SIX6O95475 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SIX6O95475 CICP14-201ENST00000629111 2732 ntBASIC14.06□□□□□ -0.16
SIX6O95475 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.05□□□□□ -0.16
SIX6O95475 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SIX6O95475 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.05□□□□□ -0.16
SIX6O95475 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.05□□□□□ -0.16
SIX6O95475 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.05□□□□□ -0.16
SIX6O95475 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.05□□□□□ -0.16
SIX6O95475 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.05□□□□□ -0.16
SIX6O95475 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SIX6O95475 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.05□□□□□ -0.16
SIX6O95475 TSPY12P-201ENST00000421279 868 ntBASIC14.05□□□□□ -0.16
SIX6O95475 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 IGHV3-52-201ENST00000519770 353 ntBASIC14.05□□□□□ -0.16
SIX6O95475 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SIX6O95475 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 MIR5787-201ENST00000611784 55 ntBASIC14.05□□□□□ -0.16
SIX6O95475 AL157888.1-201ENST00000631930 593 ntBASIC14.05□□□□□ -0.16
SIX6O95475 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.05□□□□□ -0.16
SIX6O95475 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SIX6O95475 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SIX6O95475 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.05□□□□□ -0.16
SIX6O95475 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIX6O95475 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
SIX6O95475 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.04□□□□□ -0.16
SIX6O95475 GGT4P-201ENST00000623672 1708 ntBASIC14.04□□□□□ -0.16
SIX6O95475 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.04□□□□□ -0.16
SIX6O95475 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms