Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
BEST1O76090 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 AC090340.1-201ENST00000620778 4980 ntBASIC17.51■□□□□ 0.39
BEST1O76090 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BEST1O76090 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST1O76090 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST1O76090 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST1O76090 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.51■□□□□ 0.39
BEST1O76090 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BEST1O76090 AL592309.1-201ENST00000443127 649 ntBASIC17.51■□□□□ 0.39
BEST1O76090 AC069335.1-201ENST00000489972 472 ntBASIC17.51■□□□□ 0.39
BEST1O76090 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.51■□□□□ 0.39
BEST1O76090 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST1O76090 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
BEST1O76090 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.51■□□□□ 0.39
BEST1O76090 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST1O76090 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.51■□□□□ 0.39
BEST1O76090 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.51■□□□□ 0.39
BEST1O76090 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.51■□□□□ 0.39
BEST1O76090 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST1O76090 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.51■□□□□ 0.39
BEST1O76090 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.51■□□□□ 0.39
BEST1O76090 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST1O76090 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
BEST1O76090 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
BEST1O76090 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.5■□□□□ 0.39
BEST1O76090 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.5■□□□□ 0.39
BEST1O76090 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BEST1O76090 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.5■□□□□ 0.39
BEST1O76090 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.5■□□□□ 0.39
BEST1O76090 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.5■□□□□ 0.39
BEST1O76090 RN7SL589P-201ENST00000481268 310 ntBASIC17.5■□□□□ 0.39
BEST1O76090 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.5■□□□□ 0.39
BEST1O76090 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.5■□□□□ 0.39
BEST1O76090 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.5■□□□□ 0.39
BEST1O76090 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
BEST1O76090 AC004835.2-201ENST00000603762 682 ntBASIC17.5■□□□□ 0.39
BEST1O76090 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.5■□□□□ 0.39
BEST1O76090 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.5■□□□□ 0.39
BEST1O76090 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
BEST1O76090 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BEST1O76090 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.5■□□□□ 0.39
BEST1O76090 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
BEST1O76090 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
BEST1O76090 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST1O76090 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.5■□□□□ 0.39
BEST1O76090 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
BEST1O76090 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST1O76090 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
BEST1O76090 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
BEST1O76090 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
BEST1O76090 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 AL139400.1-201ENST00000366220 510 ntBASIC17.49■□□□□ 0.39
BEST1O76090 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BEST1O76090 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.49■□□□□ 0.39
BEST1O76090 FAM58DP-201ENST00000428076 619 ntBASIC17.49■□□□□ 0.39
BEST1O76090 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.49■□□□□ 0.39
BEST1O76090 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.49■□□□□ 0.39
BEST1O76090 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.49■□□□□ 0.39
BEST1O76090 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.49■□□□□ 0.39
BEST1O76090 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms