Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 HLA-A-202ENST00000376806 1854 ntBASIC16.68■□□□□ 0.26
SUPT3HO75486 AL391256.1-201ENST00000443260 1855 ntBASIC16.68■□□□□ 0.26
SUPT3HO75486 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.68■□□□□ 0.26
SUPT3HO75486 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.68■□□□□ 0.26
SUPT3HO75486 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.68■□□□□ 0.26
SUPT3HO75486 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.68■□□□□ 0.26
SUPT3HO75486 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SUPT3HO75486 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SUPT3HO75486 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.68■□□□□ 0.26
SUPT3HO75486 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.67■□□□□ 0.26
SUPT3HO75486 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.67■□□□□ 0.26
SUPT3HO75486 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 AC243591.1-201ENST00000452967 1364 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SUPT3HO75486 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.67■□□□□ 0.26
SUPT3HO75486 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.67■□□□□ 0.26
SUPT3HO75486 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 AP002414.1-201ENST00000391405 1147 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 HCG4P8-203ENST00000443049 980 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 AC106795.1-205ENST00000512851 1056 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.67■□□□□ 0.26
SUPT3HO75486 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 DUX4L17-201ENST00000557360 1267 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.67■□□□□ 0.26
SUPT3HO75486 MIR3652-201ENST00000579335 131 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 AL353135.1-201ENST00000606729 504 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SUPT3HO75486 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.67■□□□□ 0.26
SUPT3HO75486 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SUPT3HO75486 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.67■□□□□ 0.26
SUPT3HO75486 AL022326.1-202ENST00000641533 845 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SUPT3HO75486 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 NCF1C-201ENST00000438382 1427 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
SUPT3HO75486 DOC2GP-204ENST00000639052 2548 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SUPT3HO75486 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.67■□□□□ 0.26
SUPT3HO75486 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 AL590787.1-201ENST00000568856 1315 ntBASIC16.67■□□□□ 0.26
SUPT3HO75486 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SUPT3HO75486 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.67■□□□□ 0.26
SUPT3HO75486 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.66■□□□□ 0.26
SUPT3HO75486 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.66■□□□□ 0.26
SUPT3HO75486 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SUPT3HO75486 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SUPT3HO75486 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
SUPT3HO75486 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SUPT3HO75486 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SUPT3HO75486 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.66■□□□□ 0.26
SUPT3HO75486 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SUPT3HO75486 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SUPT3HO75486 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 NKAPP1-205ENST00000585790 367 ntBASIC16.66■□□□□ 0.26
SUPT3HO75486 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SUPT3HO75486 AC064862.7-201ENST00000604520 867 ntBASIC16.66■□□□□ 0.26
SUPT3HO75486 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.66■□□□□ 0.26
SUPT3HO75486 AL139288.1-201ENST00000623748 933 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms