Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
HCN1O60741 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HCN1O60741 KRT18P13-201ENST00000400056 1290 ntBASIC15.72■□□□□ 0.11
HCN1O60741 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.72■□□□□ 0.11
HCN1O60741 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.72■□□□□ 0.11
HCN1O60741 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.72■□□□□ 0.11
HCN1O60741 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.72■□□□□ 0.11
HCN1O60741 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.72■□□□□ 0.11
HCN1O60741 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 AC006538.3-201ENST00000612495 578 ntBASIC15.72■□□□□ 0.11
HCN1O60741 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.72■□□□□ 0.11
HCN1O60741 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HCN1O60741 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.72■□□□□ 0.11
HCN1O60741 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.72■□□□□ 0.11
HCN1O60741 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCN1O60741 FLJ16779-201ENST00000612722 7638 ntBASIC15.71■□□□□ 0.11
HCN1O60741 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HCN1O60741 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.71■□□□□ 0.11
HCN1O60741 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.71■□□□□ 0.11
HCN1O60741 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.71■□□□□ 0.11
HCN1O60741 FLJ38576-201ENST00000623820 2459 ntBASIC15.71■□□□□ 0.11
HCN1O60741 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
HCN1O60741 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.71■□□□□ 0.11
HCN1O60741 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.71■□□□□ 0.11
HCN1O60741 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.71■□□□□ 0.11
HCN1O60741 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
HCN1O60741 KRT18P3-201ENST00000451602 1288 ntBASIC15.71■□□□□ 0.11
HCN1O60741 AC124947.2-201ENST00000547118 1133 ntBASIC15.71■□□□□ 0.11
HCN1O60741 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.71■□□□□ 0.11
HCN1O60741 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
HCN1O60741 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HCN1O60741 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.71■□□□□ 0.11
HCN1O60741 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.71■□□□□ 0.11
HCN1O60741 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCN1O60741 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HCN1O60741 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.71■□□□□ 0.1
HCN1O60741 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HCN1O60741 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.71■□□□□ 0.1
HCN1O60741 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.71■□□□□ 0.1
HCN1O60741 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.1
HCN1O60741 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.71■□□□□ 0.1
HCN1O60741 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
HCN1O60741 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.7■□□□□ 0.1
HCN1O60741 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 AC092053.1-201ENST00000605787 1936 ntBASIC15.7■□□□□ 0.1
HCN1O60741 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
HCN1O60741 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.7■□□□□ 0.1
HCN1O60741 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 ELK2BP-201ENST00000415014 1224 ntBASIC15.7■□□□□ 0.1
HCN1O60741 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.7■□□□□ 0.1
HCN1O60741 AC108751.1-201ENST00000490852 363 ntBASIC15.7■□□□□ 0.1
HCN1O60741 RNA5SP416-201ENST00000516838 111 ntBASIC15.7■□□□□ 0.1
HCN1O60741 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.7■□□□□ 0.1
HCN1O60741 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HCN1O60741 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HCN1O60741 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCN1O60741 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms