Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GFRA3O60609 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GFRA3O60609 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
GFRA3O60609 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
GFRA3O60609 AL442647.2-201ENST00000429864 857 ntBASIC16.06■□□□□ 0.16
GFRA3O60609 AC016694.1-201ENST00000434179 700 ntBASIC16.06■□□□□ 0.16
GFRA3O60609 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GFRA3O60609 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.06■□□□□ 0.16
GFRA3O60609 IMP3P2-201ENST00000489760 475 ntBASIC16.06■□□□□ 0.16
GFRA3O60609 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GFRA3O60609 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GFRA3O60609 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.06■□□□□ 0.16
GFRA3O60609 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.06■□□□□ 0.16
GFRA3O60609 CHMP4BP1-201ENST00000556017 588 ntBASIC16.06■□□□□ 0.16
GFRA3O60609 MIR3619-201ENST00000579667 83 ntBASIC16.06■□□□□ 0.16
GFRA3O60609 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.06■□□□□ 0.16
GFRA3O60609 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.06■□□□□ 0.16
GFRA3O60609 AL139327.4-201ENST00000612362 153 ntBASIC16.06■□□□□ 0.16
GFRA3O60609 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.06■□□□□ 0.16
GFRA3O60609 AP003419.4-201ENST00000616071 517 ntBASIC16.06■□□□□ 0.16
GFRA3O60609 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
GFRA3O60609 AC008687.7-202ENST00000637404 953 ntBASIC16.06■□□□□ 0.16
GFRA3O60609 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
GFRA3O60609 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GFRA3O60609 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.06■□□□□ 0.16
GFRA3O60609 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GFRA3O60609 AC126763.1-201ENST00000552015 2118 ntBASIC16.06■□□□□ 0.16
GFRA3O60609 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.06■□□□□ 0.16
GFRA3O60609 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GFRA3O60609 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GFRA3O60609 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GFRA3O60609 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
GFRA3O60609 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.05■□□□□ 0.16
GFRA3O60609 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
GFRA3O60609 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.05■□□□□ 0.16
GFRA3O60609 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.05■□□□□ 0.16
GFRA3O60609 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.05■□□□□ 0.16
GFRA3O60609 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.05■□□□□ 0.16
GFRA3O60609 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.05■□□□□ 0.16
GFRA3O60609 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.05■□□□□ 0.16
GFRA3O60609 AC007969.1-201ENST00000433675 447 ntBASIC16.05■□□□□ 0.16
GFRA3O60609 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.05■□□□□ 0.16
GFRA3O60609 AC004898.1-201ENST00000451057 766 ntBASIC16.05■□□□□ 0.16
GFRA3O60609 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.05■□□□□ 0.16
GFRA3O60609 RN7SL399P-201ENST00000471648 279 ntBASIC16.05■□□□□ 0.16
GFRA3O60609 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.05■□□□□ 0.16
GFRA3O60609 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.05■□□□□ 0.16
GFRA3O60609 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.05■□□□□ 0.16
GFRA3O60609 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.05■□□□□ 0.16
GFRA3O60609 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.05■□□□□ 0.16
GFRA3O60609 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.05■□□□□ 0.16
GFRA3O60609 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.05■□□□□ 0.16
GFRA3O60609 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
GFRA3O60609 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.05■□□□□ 0.16
GFRA3O60609 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
GFRA3O60609 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
GFRA3O60609 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GFRA3O60609 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
GFRA3O60609 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.04■□□□□ 0.16
GFRA3O60609 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.04■□□□□ 0.16
GFRA3O60609 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GFRA3O60609 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GFRA3O60609 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.04■□□□□ 0.16
GFRA3O60609 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GFRA3O60609 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.04■□□□□ 0.16
GFRA3O60609 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.04■□□□□ 0.16
GFRA3O60609 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
GFRA3O60609 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GFRA3O60609 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GFRA3O60609 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GFRA3O60609 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GFRA3O60609 SPDYE17-201ENST00000412399 783 ntBASIC16.04■□□□□ 0.16
GFRA3O60609 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GFRA3O60609 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.04■□□□□ 0.16
GFRA3O60609 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GFRA3O60609 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.04■□□□□ 0.16
GFRA3O60609 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GFRA3O60609 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.04■□□□□ 0.16
GFRA3O60609 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.04■□□□□ 0.16
GFRA3O60609 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GFRA3O60609 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GFRA3O60609 AC074044.1-201ENST00000609673 707 ntBASIC16.04■□□□□ 0.16
GFRA3O60609 AL353726.2-201ENST00000623259 884 ntBASIC16.04■□□□□ 0.16
GFRA3O60609 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GFRA3O60609 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
GFRA3O60609 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GFRA3O60609 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GFRA3O60609 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms